Strain identifier
BacDive ID: 169721
Type strain: 
Species: Limisalsivibrio acetivorans
Strain Designation: L21-Ace-BES
Strain history: <- S. Spring, Leibniz-Institut DSMZ GmbH; L21-Ace-BES <- S. Spring {2012}
NCBI tax ID(s): 1304888 (species)
General
@ref: 69138
BacDive-ID: 169721
DSM-Number: 26904
keywords: genome sequence, 16S sequence, Bacteria, anaerobe, Gram-negative
description: Limisalsivibrio acetivorans L21-Ace-BES is an anaerobe, Gram-negative bacterium that was isolated from hypersaline microbial mat.
NCBI tax id
- NCBI tax id: 1304888
- Matching level: species
strain history
- @ref: 69138
- history: <- S. Spring, Leibniz-Institut DSMZ GmbH; L21-Ace-BES <- S. Spring {2012}
doi: 10.13145/bacdive169721.20240916.9.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/deferribacterota
- domain: Bacteria
- phylum: Deferribacterota
- class: Deferribacteres
- order: Deferribacterales
- family: Geovibrionaceae
- genus: Limisalsivibrio
- species: Limisalsivibrio acetivorans
- full scientific name: Limisalsivibrio acetivorans Spring et al. 2022
@ref: 69138
domain: Bacteria
phylum: Deferribacterota
class: Deferribacteres
order: Deferribacterales
family: Geovibrionaceae
genus: Limisalsivibrio
species: Limisalsivibrio acetivorans
full scientific name: Limisalsivibrio acetivorans
strain designation: L21-Ace-BES
type strain: no
Morphology
cell morphology
- @ref: 69480
- gram stain: negative
- confidence: 96.085
Culture and growth conditions
culture medium
- @ref: 69138
- name: LIMISALSIVIBRIO (L21 LS) MEDIUM (DSMZ Medium 1526d)
- growth: yes
- link: https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium1526d.pdf
culture temp
- @ref: 69138
- growth: positive
- type: growth
- temperature: 35
Isolation, sampling and environmental information
isolation
- @ref: 69138
- sample type: hypersaline microbial mat
- geographic location: Kiritimati, Lake 21
- country: Kiribati
- origin.country: KIR
- continent: Australia and Oceania
Sequence information
16S sequences
- @ref: 69138
- description: Bacterium L21-Ace-BES 16S ribosomal RNA gene, partial sequence
- accession: KC631812
- length: 1542
- database: nuccore
- NCBI tax ID: 1304888
Genome sequences
- @ref: 66792
- description: Limisalsivibrio acetivorans L21-Ace-BES
- accession: GCA_000421105
- assembly level: scaffold
- database: ncbi
- NCBI tax ID: 1304888
GC content
- @ref: 69138
- GC-content: 48.5
- method: sequence analysis
Genome-based predictions
predictions
| @ref | trait | model | description | prediction | confidence | training_data |
|---|---|---|---|---|---|---|
| 69480 | gram-positive | gram-positive | Positive reaction to Gram-staining | no | 96.085 | no |
| 69480 | anaerobic | anaerobic | Ability to grow under anoxygenic conditions (including facultative anaerobes) | yes | 76.75 | no |
| 69480 | aerobic | aerobic | Ability to grow under oxygenic conditions (including facultative aerobes) | no | 81.052 | no |
| 69480 | spore-forming | spore-forming | Ability to form endo- or exospores | no | 86.955 | no |
| 69480 | thermophilic | thermophile | Ability to grow at temperatures above or equal to 45°C | no | 82.532 | yes |
| 69480 | flagellated | motile2+ | Ability to perform flagellated movement | yes | 70.396 | no |
External links
@ref: 69138
culture collection no.: DSM 26904, JCM 19438
straininfo link
- @ref: 115889
- straininfo: 399985
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69138 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-26904 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 26904) | |
| 69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 115889 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID399985.1 |