Strain identifier

BacDive ID: 169657

Type strain: No

Species: Microbacterium gallinarum

Strain Designation: Re1

Strain history: <- R. Gilroy, Quadram Institute Bioscience, Norwich, UK; Re1

NCBI tax ID(s): 2762209 (species)

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General

@ref: 68992

BacDive-ID: 169657

DSM-Number: 112387

keywords: Bacteria

description: Microbacterium gallinarum Re1 is a bacterium that was isolated from Chicken Faeces.

NCBI tax id

  • NCBI tax id: 2762209
  • Matching level: species

strain history

  • @ref: 68992
  • history: <- R. Gilroy, Quadram Institute Bioscience, Norwich, UK; Re1

doi: 10.13145/bacdive169657.20240510.9

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Micrococcales
  • family: Microbacteriaceae
  • genus: Microbacterium
  • species: Microbacterium gallinarum
  • full scientific name: Microbacterium gallinarum Gilroy et al. 2021

@ref: 68992

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Micrococcales

family: Microbacteriaceae

genus: Microbacterium

species: Microbacterium gallinarum

full scientific name: Microbacterium gallinarum

strain designation: Re1

type strain: no

Culture and growth conditions

culture medium

@refnamegrowthlink
68992COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)yeshttps://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium693.pdf
68992TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)yeshttps://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium92.pdf

culture temp

  • @ref: 68992
  • growth: positive
  • type: growth
  • temperature: 37

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6836925115malate-assimilation
6836917128adipate-assimilation
6836927689decanoate-assimilation
6836924265gluconate+assimilation
6836917306maltose+assimilation
6836959640N-acetylglucosamine-assimilation
6836916899D-mannitol-assimilation
6836916024D-mannose+assimilation
6836930849L-arabinose+assimilation
6836917634D-glucose+assimilation
683695291gelatin-hydrolysis
683694853esculin+hydrolysis
6836916199urea-hydrolysis
6836929016arginine-hydrolysis
6836917634D-glucose-fermentation
6836927897tryptophan-energy source
6836917632nitrate+reduction

metabolite production

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68369cytochrome oxidase-1.9.3.1
68369gelatinase-
68369beta-glucosidase+3.2.1.21
68369urease-3.5.1.5
68369arginine dihydrolase-3.5.3.6

API 20NE

@refNO3TRPGLU_ FermADH ArgUREESCGELPNPGGLU_ AssimARAMNEMANNAGMALGNTCAPADIMLTCITPACOX
68992+----+-++++--++------

Isolation, sampling and environmental information

isolation

  • @ref: 68992
  • sample type: Chicken Faeces
  • geographic location: Norwich
  • country: United Kingdom
  • origin.country: GBR
  • continent: Europe

External links

@ref: 68992

culture collection no.: DSM 112387

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
68369Automatically annotated from API 20NE
68992Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-112387Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 112387)