Strain identifier
BacDive ID: 169623
Type strain: 
Species: Phocaeicola sartorii
Strain Designation: CLA-AV-12
Strain history: <- T. Clavel, RWTH Aachen; CLA-AV-12
NCBI tax ID(s): 671267 (species)
General
@ref: 68945
BacDive-ID: 169623
DSM-Number: 110081
keywords: 16S sequence, Bacteria
description: Phocaeicola sartorii CLA-AV-12 is a bacterium that was isolated from caecal content; female, wild mouse.
NCBI tax id
- NCBI tax id: 671267
- Matching level: species
strain history
- @ref: 68945
- history: <- T. Clavel, RWTH Aachen; CLA-AV-12
doi: 10.13145/bacdive169623.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacteroidota
- domain: Bacteria
- phylum: Bacteroidota
- class: Bacteroidia
- order: Bacteroidales
- family: Bacteroidaceae
- genus: Phocaeicola
- species: Phocaeicola sartorii
- full scientific name: Phocaeicola sartorii (Clavel et al. 2010) García-López et al. 2020
synonyms
@ref synonym 20215 Bacteroides chinchillae 20215 Phocaeicola chinchillae 20215 Bacteroides sartorii
@ref: 68945
domain: Bacteria
phylum: Bacteroidetes
class: Bacteroidia
order: Bacteroidales
family: Bacteroidaceae
genus: Phocaeicola
species: Phocaeicola sartorii
full scientific name: Phocaeicola sartorii (Clavel et al. 2010) García-López et al. 2020
strain designation: CLA-AV-12
type strain: no
Culture and growth conditions
culture medium
| @ref | name | growth | link |
|---|---|---|---|
| 68945 | BHI MEDIUM (DSMZ Medium 215) | yes | https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium215.pdf |
| 68945 | COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) | yes | https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium693.pdf |
culture temp
- @ref: 68945
- growth: positive
- type: growth
- temperature: 37
Isolation, sampling and environmental information
isolation
- @ref: 68945
- sample type: caecal content; female, wild mouse
- geographic location: Aachen
- country: Germany
- origin.country: DEU
- continent: Europe
Safety information
risk assessment
- @ref: 68945
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 124043
- description: Phocaeicola sartorii strain DSM 110081 16S ribosomal RNA gene, partial sequence.
- accession: OM658617
- length: 1469
- database: nuccore
- NCBI tax ID: 671267
External links
@ref: 68945
culture collection no.: DSM 110081
straininfo link
- @ref: 115803
- straininfo: 407395
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 68945 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-110081 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 110081) | |
| 115803 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID407395.1 | |
| 124043 | Dr. Isabel Schober, Dr. Julia Koblitz | Data extracted from sequence databases, automatically matched based on designation and taxonomy |