Strain identifier
BacDive ID: 169491
Type strain: 
Species: Nesterenkonia sp.
Strain Designation: AN1
Strain history: <- H. Aliyu, Univ. Pretoria, South Africa; AN1 <- D. A. Cowan, Univ. Cape Town, South Africa
NCBI tax ID(s): 704201 (species)
version 9.1 (current version)
General
@ref: 68780
BacDive-ID: 169491
DSM-Number: 101602
keywords: genome sequence, 16S sequence, Bacteria
description: Nesterenkonia sp. AN1 is a bacterium that was isolated from antarctic soil.
NCBI tax id
- NCBI tax id: 704201
- Matching level: species
strain history
- @ref: 68780
- history: <- H. Aliyu, Univ. Pretoria, South Africa; AN1 <- D. A. Cowan, Univ. Cape Town, South Africa
doi: 10.13145/bacdive169491.20240916.9.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Micrococcales
- family: Micrococcaceae
- genus: Nesterenkonia
- species: Nesterenkonia sp.
- full scientific name: Nesterenkonia Stackebrandt et al. 1995
@ref: 68780
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Micrococcales
family: Micrococcaceae
genus: Nesterenkonia
species: Nesterenkonia sp.
full scientific name: Nesterenkonia sp.
strain designation: AN1
type strain: yes
Morphology
cell morphology
| @ref | gram stain | confidence | motility |
|---|---|---|---|
| 69480 | positive | 91.925 | |
| 69480 | 93.5 | no |
Culture and growth conditions
culture medium
- @ref: 68780
- name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)
- growth: yes
- link: https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium514.pdf
culture temp
- @ref: 68780
- growth: positive
- type: growth
- temperature: 20
Isolation, sampling and environmental information
isolation
- @ref: 68780
- sample type: antarctic soil
- country: Antarctica
- origin.country: ATA
- continent: Australia and Oceania
Sequence information
16S sequences
- @ref: 68780
- description: Nesterenkonia sp. AN1 16S ribosomal RNA gene, partial sequence
- accession: GQ153973.1
- length: 1492
- database: nuccore
- NCBI tax ID: 652017
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Nesterenkonia sp. AN1 | GCA_000582475 | contig | ncbi | 652017 |
| 66792 | Nesterenkonia sp. AN1 | 652017.6 | wgs | patric | 652017 |
Genome-based predictions
predictions
| @ref | trait | model | description | prediction | confidence | training_data |
|---|---|---|---|---|---|---|
| 69480 | gram-positive | gram-positive | Positive reaction to Gram-staining | yes | 91.925 | no |
| 69480 | anaerobic | anaerobic | Ability to grow under anoxygenic conditions (including facultative anaerobes) | no | 98.099 | no |
| 69480 | spore-forming | spore-forming | Ability to form endo- or exospores | no | 72.863 | no |
| 69480 | aerobic | aerobic | Ability to grow under oxygenic conditions (including facultative aerobes) | yes | 89.355 | no |
| 69480 | thermophilic | thermophile | Ability to grow at temperatures above or equal to 45°C | no | 91 | yes |
| 69480 | flagellated | motile2+ | Ability to perform flagellated movement | no | 93.5 | no |
External links
@ref: 68780
culture collection no.: DSM 101602
straininfo link
- @ref: 115702
- straininfo: 398771
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 68780 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-101602 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 101602) | |
| 69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 115702 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID398771.1 |