Strain identifier

BacDive ID: 16946

Type strain: No

Species: Actinomadura viridis

Strain history: KCC A-0297 <-- MS 2138 <-- ATCC 27888 <-- INA 1920.

NCBI tax ID(s): 58110 (species)

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General

@ref: 11037

BacDive-ID: 16946

DSM-Number: 43462

keywords: 16S sequence, Bacteria

description: Actinomadura viridis DSM 43462 is a bacterium of the family Thermomonosporaceae.

NCBI tax id

  • NCBI tax id: 58110
  • Matching level: species

strain history

@refhistory
11037<- M. Goodfellow <- G.F. Gauze, INA (Actinomadura malachitica)
67770KCC A-0297 <-- MS 2138 <-- ATCC 27888 <-- INA 1920.

doi: 10.13145/bacdive16946.20240510.9

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Streptosporangiales
  • family: Thermomonosporaceae
  • genus: Actinomadura
  • species: Actinomadura viridis
  • full scientific name: Actinomadura viridis (Nonomura and Ohara 1971) Miyadoh et al. 1989

  • synonyms

    @refsynonym
    20215Actinomadura malachitica
    20215Microtetraspora viridis

@ref: 11037

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Thermomonosporaceae

genus: Actinomadura

species: Actinomadura viridis

full scientific name: Actinomadura viridis (Nonomura and Ohara 1971) Miyadoh et al. 1989

type strain: no

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
11037GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)yeshttps://mediadive.dsmz.de/medium/65Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
11037GPHF-MEDIUM (DSMZ Medium 553)yeshttps://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium553.pdf

culture temp

@refgrowthtypetemperature
11037positivegrowth28
67770positivegrowth28

Physiology and metabolism

observation

  • @ref: 67770
  • observation: quinones: MK-9(H6), MK-9(H4), MK-9(H8)

Safety information

risk assessment

  • @ref: 11037
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Actinomadura viridis strain ATCC27888 16S ribosomal RNA gene, partial sequenceAF051383108nuccore58110
20218Actinomadura viridis strain ATCC27888 16S ribosomal RNA gene, partial sequenceAF051386195nuccore58110

GC content

@refGC-contentmethod
6777068.1thermal denaturation, midpoint method (Tm)
6777072thermal denaturation, midpoint method (Tm)
6777068thermal denaturation, midpoint method (Tm)

External links

@ref: 11037

culture collection no.: DSM 43462, ATCC 27888, IMET 9581, INA 1920, JCM 3297, BCRC 13410, IFO 14683, IMSNU 20020, NBRC 14683, NCIMB 11448, NRRL B-16125, RIA 1500, VKM Ac-631

straininfo link

  • @ref: 85951
  • straininfo: 39232

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
11037Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 43462)https://www.dsmz.de/collection/catalogue/details/culture/DSM-43462
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
85951Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID39232.1StrainInfo: A central database for resolving microbial strain identifiers