Strain identifier

BacDive ID: 169251

Type strain: No

Species: Lactobacillus sp.

Strain Designation: C1

Strain history: <- S. W. Kwon, KACC; C1 <- J.-H. Ahn

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General

@ref: 68496

BacDive-ID: 169251

DSM-Number: 28922

keywords: 16S sequence, Bacteria, mesophilic

description: Lactobacillus sp. C1 is a mesophilic bacterium that was isolated from honey bee gut.

strain history

  • @ref: 68496
  • history: <- S. W. Kwon, KACC; C1 <- J.-H. Ahn

doi: 10.13145/bacdive169251.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Lactobacillales
  • family: Lactobacillaceae
  • genus: Lactobacillus
  • species: Lactobacillus sp.
  • full scientific name: Lactobacillus Beijerinck 1901 (Approved Lists 1980)

@ref: 68496

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Lactobacillales

family: Lactobacillaceae

genus: Lactobacillus

species: Lactobacillus sp.

full scientific name: Lactobacillus sp.

strain designation: C1

type strain: no

Culture and growth conditions

culture medium

  • @ref: 68496
  • name: MRS pre-reduced (DSMZ Medium 11b)
  • growth: yes
  • link: https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium11b.pdf

culture temp

  • @ref: 68496
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837117754glycerol-builds acid from
6837117113erythritol-builds acid from
6837117108D-arabinose-builds acid from
6837130849L-arabinose-builds acid from
6837116988D-ribose-builds acid from
6837165327D-xylose-builds acid from
6837165328L-xylose-builds acid from
6837115963ribitol-builds acid from
6837174863methyl beta-D-xylopyranoside-builds acid from
6837112936D-galactose+builds acid from
6837117634D-glucose+builds acid from
6837115824D-fructose+builds acid from
6837116024D-mannose+builds acid from
6837117266L-sorbose-builds acid from
6837162345L-rhamnose-builds acid from
6837116813galactitol-builds acid from
6837117268myo-inositol-builds acid from
6837116899D-mannitol-builds acid from
6837117924D-sorbitol-builds acid from
6837143943methyl alpha-D-mannoside-builds acid from
68371320061methyl alpha-D-glucopyranoside-builds acid from
6837159640N-acetylglucosamine+builds acid from
6837127613amygdalin-builds acid from
6837118305arbutin+builds acid from
683714853esculin+builds acid from
6837117814salicin+builds acid from
6837117057cellobiose+builds acid from
6837117306maltose-builds acid from
6837117716lactose-builds acid from
6837128053melibiose-builds acid from
6837117992sucrose-builds acid from
6837127082trehalose+builds acid from
6837115443inulin-builds acid from
683716731melezitose-builds acid from
6837116634raffinose-builds acid from
6837128017starch-builds acid from
6837128087glycogen-builds acid from
6837117151xylitol-builds acid from
6837128066gentiobiose+builds acid from
6837132528turanose-builds acid from
6837162318D-lyxose-builds acid from
6837116443D-tagatose+builds acid from
6837128847D-fucose-builds acid from
6837118287L-fucose-builds acid from
6837118333D-arabitol-builds acid from
6837118403L-arabitol-builds acid from
6837124265gluconate-builds acid from
68371Potassium 2-ketogluconate-builds acid from
68371Potassium 5-ketogluconate-builds acid from

API 50CHac

@refQGLYERYDARALARARIBDXYLLXYLADOMDXGALGLUFRUMNESBERHADULINOMANSORMDMMDGNAGAMYARBESCSALCELMALLACMELSACTREINUMLZRAFAMDGLYGXLTGENTURLYXTAGDFUCLFUCDARLLARLGNT2KG5KG
68496----------++++--------+-++++----+------+--+-------

Isolation, sampling and environmental information

isolation

  • @ref: 68496
  • sample type: honey bee (Apis cerana) gut
  • geographic location: Suwon
  • country: Republic of Korea
  • origin.country: KOR
  • continent: Asia

Sequence information

16S sequences

  • @ref: 68496
  • description: Lactobacillus sp. C1 16S ribosomal RNA gene, partial sequence
  • accession: KF543104
  • length: 1488
  • database: ena
  • NCBI tax ID: 1397145

External links

@ref: 68496

culture collection no.: DSM 28922, KACC 17638

straininfo link

  • @ref: 115493
  • straininfo: 403530

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
68371Automatically annotated from API 50CH acid
68496Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-28922Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 28922)
115493Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID403530.1