Strain identifier
BacDive ID: 169154
Type strain: 
Species: Arthrobacter sp.
Strain Designation: 11W110_air
Strain history: <- A. Papadioti, URMITE, Univ. Méditerranée, Marseille, France; 11W110_air
version 8.1 (current version)
General
@ref: 68391
BacDive-ID: 169154
DSM-Number: 28602
keywords: genome sequence, 16S sequence, Bacteria, mesophilic
description: Arthrobacter sp. 11W110_air is a mesophilic bacterium that was isolated from air samples.
strain history
- @ref: 68391
- history: <- A. Papadioti, URMITE, Univ. Méditerranée, Marseille, France; 11W110_air
doi: 10.13145/bacdive169154.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Micrococcales
- family: Micrococcaceae
- genus: Arthrobacter
- species: Arthrobacter sp.
- full scientific name: Arthrobacter Conn and Dimmick 1947 (Approved Lists 1980)
@ref: 68391
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Micrococcales
family: Micrococcaceae
genus: Arthrobacter
species: Arthrobacter sp.
full scientific name: Arthrobacter sp.
strain designation: 11W110_air
type strain: no
Culture and growth conditions
culture medium
- @ref: 68391
- name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)
- growth: yes
- link: https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium92.pdf
culture temp
- @ref: 68391
- growth: positive
- type: growth
- temperature: 28
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 68391
- sample type: air samples
- geographic location: city of Makkah
- country: Saudi Arabia
- origin.country: SAU
- continent: Asia
Sequence information
16S sequences
- @ref: 68391
- description: Arthrobacter sp. 11W110_air partial 16S rRNA gene, isolate 11W110_air
- accession: HG931344
- length: 1488
- database: ena
- NCBI tax ID: 1461584
Genome sequences
- @ref: 66792
- description: Arthrobacter sp. 11W110_air
- accession: 1461584.3
- assembly level: wgs
- database: patric
- NCBI tax ID: 1461584
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| motile | no | 57.03 | no |
| gram-positive | yes | 92.915 | no |
| anaerobic | no | 99.122 | no |
| aerobic | yes | 92.814 | no |
| halophile | no | 63.358 | no |
| spore-forming | no | 87.771 | no |
| thermophile | no | 97.905 | no |
| glucose-util | yes | 84.171 | no |
| flagellated | no | 94.315 | no |
| glucose-ferment | no | 82.285 | no |
External links
@ref: 68391
culture collection no.: DSM 28602
straininfo link
- @ref: 115401
- straininfo: 402764
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 68391 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-28602 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 28602) | |
| 115401 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID402764.1 |