Strain identifier
BacDive ID: 168635
Type strain: 
Species: Providencia thailandensis
Strain Designation: C1112
NCBI tax ID(s): 990144 (species)
version 9.1 (current version)
General
@ref: 20215
BacDive-ID: 168635
keywords: genome sequence, 16S sequence, Bacteria, Gram-negative
description: Providencia thailandensis C1112 is a Gram-negative bacterium of the family Morganellaceae.
NCBI tax id
- NCBI tax id: 990144
- Matching level: species
doi: 10.13145/bacdive168635.20240916.9.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Enterobacterales
- family: Morganellaceae
- genus: Providencia
- species: Providencia thailandensis
- full scientific name: Providencia thailandensis Khunthongpan et al. 2014
@ref: 20215
domain: Bacteria
phylum: Pseudomonadota
class: Gammaproteobacteria
order: Enterobacterales
family: Morganellaceae
genus: Providencia
species: Providencia thailandensis
full scientific name: Providencia thailandensis Khunthongpan et al. 2014
strain designation: C1112
type strain: yes
Morphology
cell morphology
- @ref: 69480
- gram stain: negative
- confidence: 98.985
Safety information
risk assessment
- @ref: 20215
- biosafety level: 1
- biosafety level comment: Risk group
Sequence information
16S sequences
- @ref: 20215
- description: Providencia thailandensis strain C1112 16S ribosomal RNA gene, partial sequence
- accession: KC447298
- length: 978
- database: nuccore
- NCBI tax ID: 990144
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Providencia thailandensis KCTC 23281 | GCA_014652175 | scaffold | ncbi | 990144 |
| 66792 | Providencia thailandensis strain KCTC 23281 | 990144.3 | wgs | patric | 990144 |
Genome-based predictions
predictions
| @ref | trait | model | description | prediction | confidence | training_data |
|---|---|---|---|---|---|---|
| 69480 | gram-positive | gram-positive | Positive reaction to Gram-staining | no | 98.985 | no |
| 69480 | anaerobic | anaerobic | Ability to grow under anoxygenic conditions (including facultative anaerobes) | no | 95.585 | no |
| 69480 | aerobic | aerobic | Ability to grow under oxygenic conditions (including facultative aerobes) | no | 61.89 | no |
| 69480 | spore-forming | spore-forming | Ability to form endo- or exospores | no | 88.896 | no |
| 69480 | thermophilic | thermophile | Ability to grow at temperatures above or equal to 45°C | no | 98.197 | no |
| 69480 | flagellated | motile2+ | Ability to perform flagellated movement | yes | 75.416 | no |
External links
@ref: 20215
culture collection no.: NBRC 106720, KCTC 23281
literature
- topic: Phylogeny
- Pubmed-ID: 23863288
- title: Providencia thailandensis sp. nov., isolated from seafood processing wastewater.
- authors: Khunthongpan S, Sumpavapol P, Tanasupawat S, Benjakul S, H-Kittikun A
- journal: J Gen Appl Microbiol
- DOI: 10.2323/jgam.59.185
- year: 2013
- mesh: Bacterial Proteins/genetics, Bacterial Typing Techniques, Base Composition, Cluster Analysis, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Fatty Acids/analysis, Industrial Waste, Microscopy, Phase-Contrast, Molecular Sequence Data, Nucleic Acid Hybridization, Phylogeny, Providencia/chemistry/*classification/genetics/*isolation & purification, RNA, Ribosomal, 16S/genetics, Seafood, Sequence Analysis, DNA, Thailand, Waste Water/*microbiology
- topic2: Genetics
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes |
| 69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes |