Strain identifier
BacDive ID: 168634
Type strain: 
Species: Sunxiuqinia rutila
Strain Designation: HG677
NCBI tax ID(s): 1397841 (species)
version 9 (current version)
General
@ref: 20215
BacDive-ID: 168634
keywords: 16S sequence, Bacteria
description: Sunxiuqinia rutila HG677 is a bacterium of the family Prolixibacteraceae.
NCBI tax id
- NCBI tax id: 1397841
- Matching level: species
doi: 10.13145/bacdive168634.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacteroidota
- domain: Bacteria
- phylum: Bacteroidota
- class: Bacteroidia
- order: Bacteroidales
- family: Prolixibacteraceae
- genus: Sunxiuqinia
- species: Sunxiuqinia rutila
- full scientific name: Sunxiuqinia rutila Yoon and Kasai 2014
@ref: 20215
domain: Bacteria
phylum: Bacteroidota
class: Bacteroidia
order: Bacteroidales
family: Prolixibacteraceae
genus: Sunxiuqinia
species: Sunxiuqinia rutila
full scientific name: Sunxiuqinia rutila Yoon and Kasai 2014
strain designation: HG677
type strain: yes
Isolation, sampling and environmental information
taxonmaps
- @ref: 69479
- File name: preview.99_25933.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_599;96_12972;97_15748;98_19487;99_25933&stattab=map
- Last taxonomy: Sunxiuqinia rutila subclade
- 16S sequence: AB851476
- Sequence Identity:
- Total samples: 858
- soil counts: 92
- aquatic counts: 676
- animal counts: 59
- plant counts: 31
Safety information
risk assessment
- @ref: 20215
- biosafety level: 1
- biosafety level comment: Risk group
Sequence information
16S sequences
- @ref: 20215
- description: Sunxiuqinia rutila gene for 16S ribosomal RNA, partial sequence
- accession: AB851476
- length: 1446
- database: nuccore
- NCBI tax ID: 1397841
External links
@ref: 20215
culture collection no.: KCTC 32434, NBRC 109919
literature
| topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
|---|---|---|---|---|---|---|---|---|
| Phylogeny | 24646759 | Sunxiuqinia rutila sp. nov., a new member of the phylum Bacteroidetes isolated from marine sediment. | Yoon J, Kasai H | J Gen Appl Microbiol | 10.2323/jgam.60.28 | 2014 | Bacteroidetes/*genetics/*isolation & purification/metabolism, Base Composition, DNA, Bacterial/chemistry/genetics, Genes, Bacterial, Genes, rRNA, Geologic Sediments/microbiology, Japan, Lipid Metabolism, Nucleic Acid Hybridization, Phenotype, Phylogeny, RNA, Bacterial/genetics, RNA, Ribosomal, 16S/genetics, Species Specificity | Metabolism |
| Phylogeny | 32538740 | Sunxiuqinia indica sp. nov., isolated from deep sea. | Li J, Qi M, Lai Q, Wang G, Shao Z | Int J Syst Evol Microbiol | 10.1099/ijsem.0.004273 | 2020 | Bacterial Typing Techniques, Bacteroidetes/*classification/isolation & purification, Base Composition, DNA, Bacterial/genetics, Fatty Acids/chemistry, Glycolipids/chemistry, Indian Ocean, Nucleic Acid Hybridization, Phospholipids/chemistry, *Phylogeny, Pigmentation, RNA, Ribosomal, 16S/genetics, Seawater/*microbiology, Sequence Analysis, DNA, Vitamin K 2/analogs & derivatives/chemistry | Transcriptome |
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |