Strain identifier
BacDive ID: 168631
Type strain: 
Species: Shimia aquaeponti
Strain Designation: GJSW-22
NCBI tax ID(s): 1510456 (species)
version 9 (current version)
General
@ref: 20215
BacDive-ID: 168631
keywords: 16S sequence, Bacteria
description: Shimia aquaeponti GJSW-22 is a bacterium of the family Roseobacteraceae.
NCBI tax id
- NCBI tax id: 1510456
- Matching level: species
doi: 10.13145/bacdive168631.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Alphaproteobacteria
- order: Rhodobacterales
- family: Roseobacteraceae
- genus: Shimia
- species: Shimia aquaeponti
- full scientific name: Shimia aquaeponti (Park et al. 2015) Wirth and Whitman 2018
synonyms
@ref synonym 20215 Thalassovita aquaeponti 20215 Thalassobius aquaeponti
@ref: 20215
domain: Bacteria
phylum: Pseudomonadota
class: Alphaproteobacteria
order: Rhodobacterales
family: Rhodobacteraceae
genus: Shimia
species: Shimia aquaeponti
full scientific name: Shimia aquaeponti (Park et al. 2015) Wirth and Whitman 2018
strain designation: GJSW-22
type strain: yes
Safety information
risk assessment
- @ref: 20215
- biosafety level: 1
- biosafety level comment: Risk group
Sequence information
16S sequences
- @ref: 20215
- description: Shimia aquaeponti strain GJSW-22 16S ribosomal RNA gene, partial sequence
- accession: KJ729030
- length: 1386
- database: nuccore
- NCBI tax ID: 1510456
External links
@ref: 20215
culture collection no.: KCTC 42115, NBRC 110378
literature
- topic: Phylogeny
- Pubmed-ID: 25001228
- title: Thalassobius aquaeponti sp. nov., an alphaproteobacterium isolated from seawater.
- authors: Park S, Jung YT, Won SM, Park JM, Yoon JH
- journal: Antonie Van Leeuwenhoek
- DOI: 10.1007/s10482-014-0225-1
- year: 2014
- mesh: Aerobiosis, Bacterial Typing Techniques, Base Composition, Cluster Analysis, Cytosol/chemistry, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Fatty Acids/analysis, Hydrogen-Ion Concentration, Korea, Molecular Sequence Data, Nucleic Acid Hybridization, Phospholipids/analysis, Phylogeny, Quinones/analysis, RNA, Ribosomal, 16S/genetics, Rhodobacteraceae/*classification/genetics/*isolation & purification/physiology, Seawater/*microbiology, Sequence Analysis, DNA, Sodium Chloride/metabolism, Temperature
- topic2: Genetics
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |