Strain identifier
BacDive ID: 168382
Type strain: 
Species: Prevotella illustrans
Strain Designation: A2931
Strain history: <- M. Buhl, Institute of Medical Microbiology and Hygiene, Tuebingen University Hospital and Faculty of Medicine; A2931
NCBI tax ID(s): 2800387 (species)
General
@ref: 20215
BacDive-ID: 168382
DSM-Number: 108028
keywords: genome sequence, 16S sequence, Bacteria, mesophilic
description: Prevotella illustrans A2931 is a mesophilic bacterium that was isolated from Abscess puncture fluid.
NCBI tax id
- NCBI tax id: 2800387
- Matching level: species
strain history
- @ref: 69094
- history: <- M. Buhl, Institute of Medical Microbiology and Hygiene, Tuebingen University Hospital and Faculty of Medicine; A2931
doi: 10.13145/bacdive168382.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacteroidota
- domain: Bacteria
- phylum: Bacteroidota
- class: Bacteroidia
- order: Bacteroidales
- family: Prevotellaceae
- genus: Prevotella
- species: Prevotella illustrans
- full scientific name: Prevotella illustrans Buhl et al. 2021
@ref: 20215
domain: Bacteria
phylum: Bacteroidota
class: Bacteroidia
order: Bacteroidales
family: Prevotellaceae
genus: Prevotella
species: Prevotella illustrans
full scientific name: Prevotella illustrans Buhl et al. 2021
strain designation: A2931
type strain: yes
Culture and growth conditions
culture medium
- @ref: 69094
- name: PYG MEDIUM (MODIFIED) (DSMZ Medium 104)
- growth: yes
- link: https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium104.pdf
culture temp
- @ref: 69094
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 69094
- sample type: Abscess puncture fluid
- geographic location: Tübingen
- country: Germany
- origin.country: DEU
- continent: Europe
Sequence information
16S sequences
- @ref: 20215
- description: Prevotella illustrans strain A2931 16S ribosomal RNA gene, partial sequence
- accession: MT675969
- length: 1489
- database: ena
- NCBI tax ID: 2800387
Genome sequences
- @ref: 66792
- description: Prevotella illustrans A2931
- accession: GCA_017426725
- assembly level: scaffold
- database: ncbi
- NCBI tax ID: 2800387
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| flagellated | no | 97.365 | no |
| gram-positive | no | 97.386 | no |
| anaerobic | yes | 98.113 | no |
| aerobic | no | 98.709 | no |
| halophile | no | 77.128 | no |
| spore-forming | no | 96.096 | no |
| thermophile | no | 97.638 | yes |
| glucose-util | yes | 90.252 | no |
| motile | no | 93.262 | no |
| glucose-ferment | yes | 58.154 | no |
External links
@ref: 20215
culture collection no.: CCOS 1232, CCUG 72806, DSM 108028
straininfo link
- @ref: 115162
- straininfo: 406789
literature
- topic: Phylogeny
- Pubmed-ID: 34908520
- title: Prevotella illustrans sp. nov., derived from human oropharyngeal abscess puncture fluid.
- authors: Buhl MEJ, Meier-Kolthoff JP, Marschal M
- journal: Int J Syst Evol Microbiol
- DOI: 10.1099/ijsem.0.005146
- year: 2021
- mesh: *Abscess/microbiology, Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Fatty Acids/chemistry, Humans, Oropharynx/*microbiology, *Phylogeny, Prevotella/*classification/isolation & purification, Punctures, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA
- topic2: Pathogenicity
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69094 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-108028 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 108028) | |
| 115162 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID406789.1 |