Strain identifier
BacDive ID: 16829
Type strain: 
Species: Thermoanaerobacter thermohydrosulfuricus
Strain Designation: Sol1
Strain history: <- M. Klingeberg, Sol1 (Clostridium thermohydrosulfuricum)
NCBI tax ID(s): 1516 (species)
version 9.1 (current version)
General
@ref: 2946
BacDive-ID: 16829
DSM-Number: 7021
keywords: genome sequence, Bacteria, anaerobe, spore-forming
description: Thermoanaerobacter thermohydrosulfuricus Sol1 is an anaerobe, spore-forming bacterium that was isolated from mud.
NCBI tax id
- NCBI tax id: 1516
- Matching level: species
strain history
- @ref: 2946
- history: <- M. Klingeberg, Sol1 (Clostridium thermohydrosulfuricum)
doi: 10.13145/bacdive16829.20240916.9.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Clostridia
- order: Thermoanaerobacterales
- family: Thermoanaerobacteraceae
- genus: Thermoanaerobacter
- species: Thermoanaerobacter thermohydrosulfuricus
- full scientific name: Thermoanaerobacter thermohydrosulfuricus (Klaushofer and Parkkinen 1965) Lee et al. 1993
synonyms
- @ref: 20215
- synonym: Clostridium thermohydrosulfuricum
@ref: 2946
domain: Bacteria
phylum: Firmicutes
class: Clostridia
order: Thermoanaerobacterales
family: Thermoanaerobacteraceae
genus: Thermoanaerobacter
species: Thermoanaerobacter thermohydrosulfuricus
full scientific name: Thermoanaerobacter thermohydrosulfuricus (Klaushofer and Parkkinen 1965) Lee et al. 1993
strain designation: Sol1
type strain: no
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 2946 | THERMOANAEROBACTER BROCKII MEDIUM (DSMZ Medium 144) | yes | https://mediadive.dsmz.de/medium/144 | Name: THERMOANAEROBACTER BROCKII MEDIUM (DSMZ Medium 144) Composition: Trypticase peptone 10.0 g/l D-Glucose 5.0 g/l Yeast extract 3.0 g/l K2HPO4 1.5 g/l Na2S x 9 H2O 1.0 g/l NH4Cl 0.9 g/l KH2PO4 0.75 g/l MgCl2 x 6 H2O 0.4 g/l Nitrilotriacetic acid 0.1152 g/l NaCl 0.009 g/l FeSO4 x 7 H2O 0.003 g/l FeCl2 x 4 H2O 0.0018 g/l CoCl2 x 6 H2O 0.00153 g/l MnCl2 x 4 H2O 0.0009 g/l CaCl2 x 2 H2O 0.0009 g/l ZnCl2 0.0009 g/l Sodium resazurin 0.0005 g/l NiCl2 x 6 H2O 0.00027 g/l Na2SeO3 x 5 H2O 0.00027 g/l CuCl2 0.00018 g/l H3BO3 9e-05 g/l Na2MoO4 x 2 H2O 9e-05 g/l Pyridoxine hydrochloride 5e-05 g/l p-Aminobenzoic acid 2.5e-05 g/l (DL)-alpha-Lipoic acid 2.5e-05 g/l Riboflavin 2.5e-05 g/l Calcium D-(+)-pantothenate 2.5e-05 g/l Thiamine HCl 2.5e-05 g/l Nicotinic acid 2.5e-05 g/l Biotin 1e-05 g/l Folic acid 1e-05 g/l Vitamin B12 5e-07 g/l Distilled water |
| 2946 | THERMOANAEROBACTER MEDIUM (DSMZ Medium 61) | yes | https://mediadive.dsmz.de/medium/61 | Name: THERMOANAEROBACTER MEDIUM (DSMZ Medium 61) Composition: Sucrose 10.0 g/l Tryptone 10.0 g/l Yeast extract 2.0 g/l Na2SO3 0.2 g/l FeSO4 x 7 H2O 0.2 g/l Na2S2O3 x 5 H2O 0.08 g/l Sodium resazurin 0.0005 g/l Distilled water |
culture temp
- @ref: 2946
- growth: positive
- type: growth
- temperature: 65
Physiology and metabolism
oxygen tolerance
| @ref | oxygen tolerance | confidence |
|---|---|---|
| 2946 | anaerobe | |
| 69480 | anaerobe | 95.275 |
compound production
- @ref: 2946
- compound: pullulanase
Isolation, sampling and environmental information
isolation
- @ref: 2946
- sample type: mud
- geographic location: Solar Lake
- country: Israel
- origin.country: ISR
- continent: Asia
isolation source categories
- Cat1: #Environmental
- Cat2: #Terrestrial
- Cat3: #Mud (Sludge)
Safety information
risk assessment
- @ref: 2946
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Thermoanaerobacter thermohydrosulfuricus DSM 7021 | GCA_900112905 | scaffold | ncbi | 1516 |
| 66792 | Thermoanaerobacter thermohydrosulfuricus strain DSM 7021 | 1516.6 | wgs | patric | 1516 |
| 66792 | Thermoanaerobacter thermohydrosulfuricus DSM 7021 | 2597490336 | draft | img | 1516 |
Genome-based predictions
predictions
| @ref | trait | model | description | prediction | confidence | training_data |
|---|---|---|---|---|---|---|
| 69480 | gram-positive | gram-positive | Positive reaction to Gram-staining | yes | 57.975 | no |
| 69480 | anaerobic | anaerobic | Ability to grow under anoxygenic conditions (including facultative anaerobes) | yes | 95.275 | yes |
| 69480 | aerobic | aerobic | Ability to grow under oxygenic conditions (including facultative aerobes) | no | 96 | no |
| 69480 | spore-forming | spore-forming | Ability to form endo- or exospores | yes | 76.526 | no |
| 69480 | thermophilic | thermophile | Ability to grow at temperatures above or equal to 45°C | yes | 69.473 | yes |
| 69480 | flagellated | motile2+ | Ability to perform flagellated movement | yes | 73.401 | no |
External links
@ref: 2946
culture collection no.: DSM 7021
straininfo link
- @ref: 85840
- straininfo: 48347
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 2946 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 7021) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-7021 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |
| 69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |
| 85840 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID48347.1 | StrainInfo: A central database for resolving microbial strain identifiers |