Strain identifier
BacDive ID: 168280
Type strain: 
Species: Bacillus toyonensis
Strain Designation: BCT-7112
Strain history: CIP <- 2016, CECT <- 1987, Esteva, Andersen Lab., Spain <- Kozawa, Japanese Toyo Jozo, Japan: strain BCT-7112
NCBI tax ID(s): 155322 (species)
version 8.1 (current version)
General
@ref: 20215
BacDive-ID: 168280
keywords: genome sequence, 16S sequence, Bacteria, Gram-positive, rod-shaped
description: Bacillus toyonensis BCT-7112 is a Gram-positive, rod-shaped bacterium that was isolated from Environment, Soil.
NCBI tax id
- NCBI tax id: 155322
- Matching level: species
strain history
- @ref: 123569
- history: CIP <- 2016, CECT <- 1987, Esteva, Andersen Lab., Spain <- Kozawa, Japanese Toyo Jozo, Japan: strain BCT-7112
doi: 10.13145/bacdive168280.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Caryophanales
- family: Bacillaceae
- genus: Bacillus
- species: Bacillus toyonensis
- full scientific name: Bacillus toyonensis Jiménez et al. 2014
@ref: 20215
domain: Bacteria
phylum: Bacillota
class: Bacilli
order: Caryophanales
family: Bacillaceae
genus: Bacillus
species: Bacillus toyonensis
full scientific name: Bacillus toyonensis Jiménez et al. 2014
strain designation: BCT-7112
type strain: yes
Morphology
cell morphology
- @ref: 123569
- gram stain: positive
- cell shape: rod-shaped
- motility: no
Culture and growth conditions
culture medium
- @ref: 123569
- name: CIP Medium 29
- growth: yes
- link: https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=29
Isolation, sampling and environmental information
isolation
- @ref: 123569
- sample type: Environment, Soil
- geographic location: Shizuoka
- country: Japan
- origin.country: JPN
- continent: Asia
Safety information
risk assessment
| @ref | biosafety level | biosafety level comment |
|---|---|---|
| 20215 | 1 | Risk group |
| 123569 | 1 | Risk group (French classification) |
Sequence information
16S sequences
- @ref: 20215
- description: Bacillus toyonensis strain BCT-7112 16S ribosomal RNA gene, partial sequence
- accession: MF574362
- length: 617
- database: ena
- NCBI tax ID: 155322
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Bacillus toyonensis BCT-7112 BCT-7112T | GCA_000496285 | complete | ncbi | 1415784 |
| 66792 | Bacillus toyonensis BCT-7112 strain BCT-7112T | 1415784.37 | plasmid | patric | 1415784 |
| 66792 | Bacillus toyonensis BCT-7112 strain BCT-7112T | 1415784.38 | plasmid | patric | 1415784 |
| 66792 | Bacillus toyonensis BCT-7112 | 1415784.4 | complete | patric | 1415784 |
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| motile | yes | 64.942 | no |
| flagellated | yes | 81.437 | no |
| gram-positive | yes | 91.524 | no |
| anaerobic | no | 98.814 | no |
| aerobic | yes | 84.356 | no |
| halophile | no | 93.593 | no |
| spore-forming | yes | 92.911 | no |
| thermophile | no | 99.511 | no |
| glucose-util | yes | 88.298 | no |
| glucose-ferment | no | 90.799 | no |
External links
@ref: 20215
culture collection no.: NCIMB 14858, CECT 876, CIP 111014
straininfo link
- @ref: 115137
- straininfo: 392102
literature
| topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
|---|---|---|---|---|---|---|---|---|
| Phylogeny | 23791203 | Description of Bacillus toyonensis sp. nov., a novel species of the Bacillus cereus group, and pairwise genome comparisons of the species of the group by means of ANI calculations. | Jimenez G, Urdiain M, Cifuentes A, Lopez-Lopez A, Blanch AR, Tamames J, Kampfer P, Kolsto AB, Ramon D, Martinez JF, Codoner FM, Rossello-Mora R | Syst Appl Microbiol | 10.1016/j.syapm.2013.04.008 | 2013 | Animal Feed/microbiology, Animals, Bacillus/chemistry/*classification/*genetics/isolation & purification, Bacterial Typing Techniques, Cluster Analysis, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Dietary Supplements/microbiology, *Genome, Bacterial, Japan, Molecular Sequence Data, Organic Chemicals/analysis, Phylogeny, Probiotics, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization | Genetics |
| Genetics | 24356843 | Complete Genome Sequence of Bacillus toyonensis BCT-7112T, the Active Ingredient of the Feed Additive Preparation Toyocerin. | Jimenez G, Blanch AR, Tamames J, Rossello-Mora R | Genome Announc | 10.1128/genomeA.01080-13 | 2013 | ||
| Metabolism | 24938520 | Comparison of procedures for the extraction of supernatants and cytotoxicity tests in Vero cells, applied to assess the toxigenic potential of Bacillus spp. and Lactobacillus spp., intended for use as probiotic strains. | Blanch AR, Mendez J, Castel S, Reina M | J Microbiol Methods | 10.1016/j.mimet.2014.05.019 | 2014 | Animals, Bacillus/*metabolism, Cells, Cultured, Chlorocebus aethiops, Culture Media, Conditioned/chemistry/*toxicity, Lactobacillus/*metabolism, Probiotics/*metabolism, Toxicity Tests/*methods, Vero Cells | Cultivation |
| Metabolism | 25806549 | Bacillus toyonensis strain AEMREG6, a bacterium isolated from South African marine environment sediment samples produces a glycoprotein bioflocculant. | Okaiyeto K, Nwodo UU, Mabinya LV, Okoh AI | Molecules | 10.3390/molecules20035239 | 2015 | Bacillus/classification/genetics/*isolation & purification/*metabolism, Bacterial Proteins/chemistry/metabolism, Carbon/metabolism, Flocculation, Geologic Sediments/*microbiology, Glycoproteins/*chemistry/*metabolism, Microscopy, Electron, Scanning, Molecular Sequence Data, Nitrates/metabolism, RNA, Bacterial/genetics, RNA, Ribosomal, 16S/genetics, South Africa | Phylogeny |
| Biotechnology | 27784948 | Screening of Bacillus Strains from Sun Vinegar for Efficient Production of Flavonoid and Phenol. | Zhao C, Zhao X, Zhang J, Zou W, Zhang Y, Li L, Liu J | Indian J Microbiol | 10.1007/s12088-016-0602-8 | 2016 | ||
| 28101085 | The Identification of Intrinsic Chloramphenicol and Tetracycline Resistance Genes in Members of the Bacillus cereus Group (sensu lato). | Glenwright H, Pohl S, Navarro F, Miro E, Jimenez G, Blanch AR, Harwood CR | Front Microbiol | 10.3389/fmicb.2016.02122 | 2017 | |||
| Biotechnology | 31022208 | Evaluation of enterotoxin gene expression and enterotoxin production capacity of the probiotic strain Bacillus toyonensis BCT-7112T. | Abdulmawjood A, Herrmann J, Riede S, Jimenez G, Becker A, Breves G | PLoS One | 10.1371/journal.pone.0214536 | 2019 | Bacillus/genetics/*metabolism, Bacillus cereus/genetics/*metabolism, Bacterial Proteins/genetics, DNA, Bacterial/genetics, Enterotoxins/*biosynthesis, Food Microbiology, Gene Expression, Gene Expression Profiling, Hemolysin Proteins/*genetics, Industrial Microbiology, Oligonucleotides/genetics, Probiotics/*analysis, Real-Time Polymerase Chain Reaction, Reference Values | Metabolism |
| Pathogenicity | 32767796 | Bacillus toyonensis BCT-7112(T) transient supplementation improves vaccine efficacy in ewes vaccinated against Clostridium perfringens epsilon toxin. | Santos FDS, Ferreira MRA, Maubrigades LR, Goncalves VS, de Lara APS, Moreira C, Salvarani FM, Conceicao FR, Leivas Leite FP | J Appl Microbiol | 10.1111/jam.14814 | 2020 | Animals, *Bacillus, Bacterial Toxins/genetics/*immunology, Bacterial Vaccines/genetics/*immunology, Female, Immunity, Humoral, Immunoglobulin G/blood, Immunomodulation, Leukocytes, Mononuclear/immunology, *Probiotics, Sheep/*immunology, Vaccination, Vaccines, Synthetic/immunology | |
| Phylogeny | 32781202 | Polyphasic characterization and identification of the bioremediation agent Bacillus sp. SFC 500-1E. | Pereira PP, Torres Tejerizo GA, Fernandez M, Blanch AR, Gonzalez PS, Agostini E | Genomics | 10.1016/j.ygeno.2020.08.008 | 2020 | Bacillus/*classification/cytology/genetics/physiology, Bacillus cereus/classification, Biodegradation, Environmental, Genome, Bacterial, Genomics, Phylogeny, RNA, Ribosomal, 16S/genetics | Genetics |
| 33608827 | Bacillus Toyonensis BCT-7112(T) Spores as Parenteral Adjuvant of BoHV-5 Vaccine in a Murine Model. | Santos FDS, Maubrigades LR, Goncalves VS, Franz HC, Rodrigues PRC, Cunha RC, Leite FPL | Probiotics Antimicrob Proteins | 10.1007/s12602-021-09753-z | 2021 | *Adjuvants, Immunologic, Animals, *Bacillus/immunology, Disease Models, Animal, Herpesviridae Infections/*prevention & control, Herpesvirus 5, Bovine, Interleukin-12, Interleukin-4, Mice, Oligopeptides, Spores, Bacterial/immunology, Viral Vaccines/*immunology | ||
| Genetics | 33777842 | Characterization of a Deep Sea Bacillus toyonensis Isolate: Genomic and Pathogenic Features. | Luo JC, Long H, Zhang J, Zhao Y, Sun L | Front Cell Infect Microbiol | 10.3389/fcimb.2021.629116 | 2021 | Animals, *Bacillus/genetics, Genome, Bacterial, Genomics, Mice, Phylogeny, Virulence | Phylogeny |
| 34029878 | Immunomodulatory effect of short-term supplementation with Bacillus toyonensis BCT-7112(T) and Saccharomyces boulardii CNCM I-745 in sheep vaccinated with Clostridium chauvoei. | Santos FDS, Maubrigades LR, Goncalves VS, Alves Ferreira MR, Brasil CL, Cunha RC, Conceicao FR, Leite FPL | Vet Immunol Immunopathol | 10.1016/j.vetimm.2021.110272 | 2021 | Animals, Antibodies, Bacterial/immunology, Bacillus/*immunology, Bacterial Vaccines/*immunology, Clostridium Infections/immunology/prevention & control/*veterinary, Clostridium chauvoei/*immunology, Female, Immunoglobulin G/immunology, Immunomodulation, Interferon-gamma/genetics, Interleukin-2/genetics, Probiotics/administration & dosage, Proto-Oncogene Proteins c-bcl-6/genetics, Saccharomyces boulardii/*immunology, Sheep, Sheep Diseases/immunology/*prevention & control, Transcription, Genetic |
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 115137 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID392102.1 | |
| 123569 | Curators of the CIP | https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20111014 | Collection of Institut Pasteur (CIP 111014) |