Strain identifier
BacDive ID: 1679
Type strain: 
Species: Beutenbergia cavernae
Strain Designation: 2163-008
Strain history: <- I. Groth <- Ch. Weigel; 2163-008 (= HKI 0132)
NCBI tax ID(s): 84757 (species)
General
@ref: 4699
BacDive-ID: 1679
DSM-Number: 12334
keywords: Bacteria
description: Beutenbergia cavernae 2163-008 is a bacterium that was isolated from cave, soil between rocks.
NCBI tax id
- NCBI tax id: 84757
- Matching level: species
strain history
- @ref: 4699
- history: <- I. Groth <- Ch. Weigel; 2163-008 (= HKI 0132)
doi: 10.13145/bacdive1679.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Micrococcales
- family: Beutenbergiaceae
- genus: Beutenbergia
- species: Beutenbergia cavernae
- full scientific name: Beutenbergia cavernae Groth et al. 1999
@ref: 4699
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Beutenbergiaceae
genus: Beutenbergia
species: Beutenbergia cavernae
full scientific name: Beutenbergia cavernae Groth et al. 1999 emend. Nouioui et al. 2018
strain designation: 2163-008
type strain: no
Culture and growth conditions
culture medium
- @ref: 4699
- name: RICH MEDIUM (DSMZ Medium 736)
- growth: yes
- link: https://mediadive.dsmz.de/medium/736
- composition: Name: RICH MEDIUM (DSMZ Medium 736) Composition: Agar 20.0 g/l Bacto peptone 10.0 g/l Yeast extract 5.0 g/l Malt extract 5.0 g/l Casamino acids 5.0 g/l Glycerol 2.0 g/l Meat extract 2.0 g/l MgSO4 x 7 H2O 1.0 g/l Tween 80 0.05 g/l Distilled water
culture temp
- @ref: 4699
- growth: positive
- type: growth
- temperature: 28
Physiology and metabolism
murein
- @ref: 4699
- murein short key: A11.54
- type: A4alpha L-Lys-L-Glu
Isolation, sampling and environmental information
isolation
- @ref: 4699
- sample type: cave, soil between rocks
- geographic location: China, Guilin, "cave of the reed flutes"
- country: China
- origin.country: CHN
- continent: Asia
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Environmental | #Terrestrial | #Geologic |
| #Environmental | #Terrestrial | #Soil |
Safety information
risk assessment
- @ref: 4699
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
GC content
- @ref: 4699
- GC-content: 71.5
- method: high performance liquid chromatography (HPLC)
External links
@ref: 4699
culture collection no.: DSM 12334, HKI 0132
straininfo link
- @ref: 71326
- straininfo: 49269
literature
- topic: Phylogeny
- Pubmed-ID: 10555355
- title: Beutenbergia cavernae gen. nov., sp. nov., an L-lysine-containing actinomycete isolated from a cave.
- authors: Groth I, Schumann P, Schuetze B, Augsten K, Kramer I, Stackebrandt E
- journal: Int J Syst Bacteriol
- DOI: 10.1099/00207713-49-4-1733
- year: 1999
- mesh: Actinomycetales/*chemistry/*classification/isolation & purification/physiology, Bacterial Typing Techniques, Cell Wall/chemistry, DNA, Bacterial/genetics, DNA, Ribosomal/genetics, Ecosystem, Lipids/analysis, Lysine/*analysis, Molecular Sequence Data, Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, *Soil Microbiology
- topic2: Genetics
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 4699 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 12334) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-12334 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 71326 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID49269.1 | StrainInfo: A central database for resolving microbial strain identifiers |