Strain identifier

BacDive ID: 16747

Type strain: Yes

Species: Laceyella tengchongensis

Strain history: <- S.-K. Tang, YIM; YIM 10002

NCBI tax ID(s): 574699 (species)

« back to strain detail view
For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
version 8.1 (current version):
version 8:
version 7.1:
version 7:
version 6:
version 5:
version 4.1:
version 4:
version 3:
version 2.1:
version 2:
version 1:
version 8.1 (current version)

General

@ref: 16034

BacDive-ID: 16747

DSM-Number: 45262

keywords: genome sequence, 16S sequence, Bacteria, thermophilic

description: Laceyella tengchongensis DSM 45262 is a thermophilic bacterium that was isolated from soil sample.

NCBI tax id

  • NCBI tax id: 574699
  • Matching level: species

strain history

  • @ref: 16034
  • history: <- S.-K. Tang, YIM; YIM 10002

doi: 10.13145/bacdive16747.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Caryophanales
  • family: Thermoactinomycetaceae
  • genus: Laceyella
  • species: Laceyella tengchongensis
  • full scientific name: Laceyella tengchongensis Zhang et al. 2010

@ref: 16034

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Bacillales

family: Thermoactinomycetaceae

genus: Laceyella

species: Laceyella tengchongensis

full scientific name: Laceyella tengchongensis Zhang et al. 2010

type strain: yes

Morphology

multimedia

  • @ref: 16034
  • multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_45262.jpg
  • caption: Medium 84 55°C
  • intellectual property rights: © Leibniz-Institut DSMZ

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
16034ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)yeshttps://mediadive.dsmz.de/medium/84Name: ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) Composition: Agar 20.0 g/l Rolled oats 20.0 g/l ZnSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l FeSO4 x 7 H2O 0.001 g/l Distilled water
16034GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)yeshttps://mediadive.dsmz.de/medium/65Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water

culture temp

  • @ref: 16034
  • growth: positive
  • type: growth
  • temperature: 55
  • range: thermophilic

Isolation, sampling and environmental information

isolation

  • @ref: 16034
  • sample type: soil sample
  • geographic location: Yunnan Province, Tengchong County, Big Empty Volcano
  • country: China
  • origin.country: CHN
  • continent: Asia

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Terrestrial
  • Cat3: #Soil

taxonmaps

  • @ref: 69479
  • File name: preview.99_11727.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_284;96_5917;97_7121;98_8795;99_11727&stattab=map
  • Last taxonomy: Laceyella
  • 16S sequence: FJ426598
  • Sequence Identity:
  • Total samples: 13670
  • soil counts: 7909
  • aquatic counts: 1320
  • animal counts: 2143
  • plant counts: 2298

Safety information

risk assessment

  • @ref: 16034
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 16034
  • description: Laceyella tengchongensis strain YIM 10002 16S ribosomal RNA gene, partial sequence
  • accession: FJ426598
  • length: 1398
  • database: ena
  • NCBI tax ID: 574699

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Laceyella tengchongensis CCTCC AA 2080502784132169draftimg574699
66792Laceyella tengchongensis DSM 452622724679819draftimg574699

GC content

  • @ref: 16034
  • GC-content: 48.6
  • method: high performance liquid chromatography (HPLC)

External links

@ref: 16034

culture collection no.: DSM 45262, CCTCC AA 208050, YIM 10002

straininfo link

  • @ref: 85765
  • straininfo: 399773

literature

topicPubmed-IDtitleauthorsjournalDOIyearmeshtopic2
Phylogeny19915116Laceyella tengchongensis sp. nov., a thermophile isolated from soil of a volcano.Zhang J, Tang SK, Zhang YQ, Yu LY, Klenk HP, Li WJInt J Syst Evol Microbiol10.1099/ijs.0.011767-02009Bacteria/*classification/genetics/*isolation & purification/metabolism, China, DNA, Bacterial/genetics, DNA, Ribosomal/genetics, Fatty Acids/metabolism, Hot Temperature, Molecular Sequence Data, Phylogeny, RNA, Ribosomal, 16S/genetics, *Soil Microbiology, Volcanic Eruptions/*analysisMetabolism
Phylogeny31310191Thermoflavimicrobium daqui sp. nov., a thermophilic microbe isolated from Moutai-flavour Daqu.Li DN, Huang W, Qiu SYInt J Syst Evol Microbiol10.1099/ijsem.0.0035282019Alcoholic Beverages/*microbiology, Bacillales/*classification/isolation & purification, Bacterial Typing Techniques, Base Composition, China, DNA, Bacterial/genetics, Diaminopimelic Acid/chemistry, Fatty Acids/chemistry, Nucleic Acid Hybridization, Peptidoglycan/chemistry, Phospholipids/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Spores, Bacterial, Vitamin K 2/chemistryTranscriptome

Reference

@idauthorscataloguedoi/urltitle
16034Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 45262)https://www.dsmz.de/collection/catalogue/details/culture/DSM-45262
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
85765Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID399773.1StrainInfo: A central database for resolving microbial strain identifiers