Strain identifier
BacDive ID: 16747
Type strain:
Species: Laceyella tengchongensis
Strain history: <- S.-K. Tang, YIM; YIM 10002
NCBI tax ID(s): 574699 (species)
version 8.1 (current version)
General
@ref: 16034
BacDive-ID: 16747
DSM-Number: 45262
keywords: genome sequence, 16S sequence, Bacteria, thermophilic
description: Laceyella tengchongensis DSM 45262 is a thermophilic bacterium that was isolated from soil sample.
NCBI tax id
- NCBI tax id: 574699
- Matching level: species
strain history
- @ref: 16034
- history: <- S.-K. Tang, YIM; YIM 10002
doi: 10.13145/bacdive16747.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Caryophanales
- family: Thermoactinomycetaceae
- genus: Laceyella
- species: Laceyella tengchongensis
- full scientific name: Laceyella tengchongensis Zhang et al. 2010
@ref: 16034
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Bacillales
family: Thermoactinomycetaceae
genus: Laceyella
species: Laceyella tengchongensis
full scientific name: Laceyella tengchongensis Zhang et al. 2010
type strain: yes
Morphology
multimedia
- @ref: 16034
- multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_45262.jpg
- caption: Medium 84 55°C
- intellectual property rights: © Leibniz-Institut DSMZ
Culture and growth conditions
culture medium
@ref | name | growth | link | composition |
---|---|---|---|---|
16034 | ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) | yes | https://mediadive.dsmz.de/medium/84 | Name: ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) Composition: Agar 20.0 g/l Rolled oats 20.0 g/l ZnSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l FeSO4 x 7 H2O 0.001 g/l Distilled water |
16034 | GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) | yes | https://mediadive.dsmz.de/medium/65 | Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water |
culture temp
- @ref: 16034
- growth: positive
- type: growth
- temperature: 55
- range: thermophilic
Isolation, sampling and environmental information
isolation
- @ref: 16034
- sample type: soil sample
- geographic location: Yunnan Province, Tengchong County, Big Empty Volcano
- country: China
- origin.country: CHN
- continent: Asia
isolation source categories
- Cat1: #Environmental
- Cat2: #Terrestrial
- Cat3: #Soil
taxonmaps
- @ref: 69479
- File name: preview.99_11727.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_284;96_5917;97_7121;98_8795;99_11727&stattab=map
- Last taxonomy: Laceyella
- 16S sequence: FJ426598
- Sequence Identity:
- Total samples: 13670
- soil counts: 7909
- aquatic counts: 1320
- animal counts: 2143
- plant counts: 2298
Safety information
risk assessment
- @ref: 16034
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 16034
- description: Laceyella tengchongensis strain YIM 10002 16S ribosomal RNA gene, partial sequence
- accession: FJ426598
- length: 1398
- database: ena
- NCBI tax ID: 574699
Genome sequences
@ref | description | accession | assembly level | database | NCBI tax ID |
---|---|---|---|---|---|
66792 | Laceyella tengchongensis CCTCC AA 208050 | 2784132169 | draft | img | 574699 |
66792 | Laceyella tengchongensis DSM 45262 | 2724679819 | draft | img | 574699 |
GC content
- @ref: 16034
- GC-content: 48.6
- method: high performance liquid chromatography (HPLC)
External links
@ref: 16034
culture collection no.: DSM 45262, CCTCC AA 208050, YIM 10002
straininfo link
- @ref: 85765
- straininfo: 399773
literature
topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
---|---|---|---|---|---|---|---|---|
Phylogeny | 19915116 | Laceyella tengchongensis sp. nov., a thermophile isolated from soil of a volcano. | Zhang J, Tang SK, Zhang YQ, Yu LY, Klenk HP, Li WJ | Int J Syst Evol Microbiol | 10.1099/ijs.0.011767-0 | 2009 | Bacteria/*classification/genetics/*isolation & purification/metabolism, China, DNA, Bacterial/genetics, DNA, Ribosomal/genetics, Fatty Acids/metabolism, Hot Temperature, Molecular Sequence Data, Phylogeny, RNA, Ribosomal, 16S/genetics, *Soil Microbiology, Volcanic Eruptions/*analysis | Metabolism |
Phylogeny | 31310191 | Thermoflavimicrobium daqui sp. nov., a thermophilic microbe isolated from Moutai-flavour Daqu. | Li DN, Huang W, Qiu SY | Int J Syst Evol Microbiol | 10.1099/ijsem.0.003528 | 2019 | Alcoholic Beverages/*microbiology, Bacillales/*classification/isolation & purification, Bacterial Typing Techniques, Base Composition, China, DNA, Bacterial/genetics, Diaminopimelic Acid/chemistry, Fatty Acids/chemistry, Nucleic Acid Hybridization, Peptidoglycan/chemistry, Phospholipids/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Spores, Bacterial, Vitamin K 2/chemistry | Transcriptome |
Reference
@id | authors | catalogue | doi/url | title |
---|---|---|---|---|
16034 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 45262) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-45262 | |
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |
85765 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID399773.1 | StrainInfo: A central database for resolving microbial strain identifiers |