Strain identifier
BacDive ID: 167292
Type strain: 
Species: Azospirillum baldaniorum
Strain Designation: Sp245
NCBI tax ID(s): 1064539 (species)
version 8.1 (current version)
General
@ref: 20215
BacDive-ID: 167292
keywords: genome sequence, 16S sequence, Bacteria
description: Azospirillum baldaniorum Sp245 is a bacterium of the family Azospirillaceae.
NCBI tax id
- NCBI tax id: 1064539
- Matching level: species
doi: 10.13145/bacdive167292.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Alphaproteobacteria
- order: Rhodospirillales
- family: Azospirillaceae
- genus: Azospirillum
- species: Azospirillum baldaniorum
- full scientific name: Azospirillum baldaniorum Dos Santos Ferreira et al. 2020
@ref: 20215
domain: Bacteria
phylum: Pseudomonadota
class: Alphaproteobacteria
order: Rhodospirillales
family: Azospirillaceae
genus: Azospirillum
species: Azospirillum baldaniorum
full scientific name: Azospirillum baldaniorum Dos Santos Ferreira et al. 2020
strain designation: Sp245
type strain: yes
Sequence information
16S sequences
- @ref: 20215
- description: Azospirillum sp. strain BR 11005 16S ribosomal RNA gene, partial sequence
- accession: MT644282
- length: 1213
- database: ena
- NCBI tax ID: 34012
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Azospirillum baldaniorum Sp245 | GCA_000237365 | chromosome | ncbi | 1064539 |
| 66792 | Azospirillum baldaniorum Sp245 | GCA_003119195 | chromosome | ncbi | 1064539 |
| 66792 | Azospirillum brasilense BR 11005 | GCA_007827915 | scaffold | ncbi | 192 |
| 66792 | Azospirillum brasilense strain BR 11005 | 192.147 | wgs | patric | 192 |
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| motile | yes | 90.555 | no |
| flagellated | yes | 69.098 | no |
| gram-positive | no | 98.802 | no |
| anaerobic | no | 92.19 | no |
| aerobic | yes | 72.207 | no |
| halophile | no | 93.888 | no |
| spore-forming | no | 89.928 | no |
| thermophile | no | 98.377 | no |
| glucose-util | yes | 86.826 | no |
| glucose-ferment | no | 88.76 | no |
External links
@ref: 20215
culture collection no.: BR 11005, IBPPM 219
literature
| topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
|---|---|---|---|---|---|---|---|---|
| Phylogeny | 33064068 | Genome-based reclassification of Azospirillum brasilense Sp245 as the type strain of Azospirillum baldaniorum sp. nov. | Dos Santos Ferreira N, Hayashi Sant' Anna F, Massena Reis V, Ambrosini A, Gazolla Volpiano C, Rothballer M, Schwab S, Baura VA, Balsanelli E, Pedrosa FO, Pereira Passaglia LM, Maltempi de Souza E, Hartmann A, Cassan F, Zilli JE | Int J Syst Evol Microbiol | 10.1099/ijsem.0.004517 | 2020 | Azospirillum/*classification, Azospirillum brasilense/*classification, Bacterial Typing Techniques, Base Composition, Brazil, DNA, Bacterial/genetics, Flagella/chemistry, *Genome, Bacterial, Nucleic Acid Hybridization, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA | Genetics |
| 33669948 | Fourier Transform Infrared (FTIR) Spectroscopic Analyses of Microbiological Samples and Biogenic Selenium Nanoparticles of Microbial Origin: Sample Preparation Effects. | Kamnev AA, Dyatlova YA, Kenzhegulov OA, Vladimirova AA, Mamchenkova PV, Tugarova AV | Molecules | 10.3390/molecules26041146 | 2021 | Azospirillum/*chemistry, Biomass, Nanoparticles/*analysis, Selenium/*analysis, Spectroscopy, Fourier Transform Infrared | ||
| Stress | 34205214 | Azospirillum baldaniorum Sp245 Induces Physiological Responses to Alleviate the Adverse Effects of Drought Stress in Purple Basil. | Mariotti L, Scartazza A, Curadi M, Picciarelli P, Toffanin A | Plants (Basel) | 10.3390/plants10061141 | 2021 | ||
| Phylogeny | 34954806 | Azospirillum tabaci sp. nov., a bacterium isolated from rhizosphere soil of Nicotiana tabacum L. | Duan YQ, Zhou XK, Habib N, Gao SQ, Dong LM, Liu XF, Shi YM, Li WJ, Du G | Arch Microbiol | 10.1007/s00203-021-02688-7 | 2021 | *Azospirillum, Bacterial Typing Techniques, DNA, Bacterial/genetics, Fatty Acids, Phospholipids, Phylogeny, RNA, Ribosomal, 16S/genetics, *Rhizosphere, Sequence Analysis, DNA, Soil, Tobacco | Transcriptome |
| 35336603 | Auxin-Producing Bacteria from Duckweeds Have Different Colonization Patterns and Effects on Plant Morphology. | Gilbert S, Poulev A, Chrisler W, Acosta K, Orr G, Lebeis S, Lam E | Plants (Basel) | 10.3390/plants11060721 | 2022 | |||
| Metabolism | 35352964 | beta-Lactam Resistance in Azospirillum baldaniorum Sp245 Is Mediated by Lytic Transglycosylase and beta-Lactamase and Regulated by a Cascade of RpoE7-->RpoH3 Sigma Factors. | Pandey P, Dubey AP, Mishra S, Singh VS, Singh C, Tripathi AK | J Bacteriol | 10.1128/jb.00010-22 | 2022 | Ampicillin/pharmacology, Anti-Bacterial Agents/pharmacology, *Azospirillum/metabolism, Glycosyltransferases/genetics, *Sigma Factor/genetics/metabolism, beta-Lactam Resistance/genetics, beta-Lactamases/genetics | |
| Phylogeny | 35913881 | Genome-based reclassification of Azospirillum brasilense Az39 as the type strain of Azospirillum argentinense sp. nov. | Dos Santos Ferreira N, Coniglio A, Puente M, Sant'Anna FH, Maroniche G, Garcia J, Molina R, Nievas S, Volpiano CG, Ambrosini A, Passaglia LMP, Pedraza RO, Reis VM, Zilli JE, Cassan F | Int J Syst Evol Microbiol | 10.1099/ijsem.0.005475 | 2022 | *Azospirillum brasilense/genetics, Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Fatty Acids/chemistry, Nucleic Acid Hybridization, Phospholipids/analysis, Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Ubiquinone/analysis | Transcriptome |
| 36063363 | Azospirillum baldaniorum Sp245 exploits Pseudomonas fluorescens A506 biofilm to overgrow in dual-species macrocolonies. | Diaz PR, Romero M, Pagnussatt L, Amenta M, Valverde CF, Camara M, Creus CM, Maroniche GA | Environ Microbiol | 10.1111/1462-2920.16195 | 2022 | |||
| 36128571 | Improving the efficacy of potato clonal micropropagation by inoculation with the rhizosphere bacteria Azospirillum baldaniorum Sp245 and Ochrobactrum cytisi IPA7.2. | Kargapolova KY, Tkachenko OV, Burygin GL, Evseeva NV, Shirokov AA, Matora LY, Shchyogolev SY | Vavilovskii Zhurnal Genet Selektsii | 10.18699/VJGB-22-52 | 2022 | |||
| Metabolism | 36417483 | The GGDEF-EAL protein CdgB from Azospirillum baldaniorum Sp245, is a dual function enzyme with potential polar localization. | Viruega-Gongora VI, Acatitla-Jacome IS, Zamorano-Sanchez D, Reyes-Carmona SR, Xiqui-Vazquez ML, Baca BE, Ramirez-Mata A | PLoS One | 10.1371/journal.pone.0278036 | 2022 | *Azospirillum, *Bacterial Proteins/genetics/metabolism, Cyclic GMP/metabolism, Gene Expression Regulation, Bacterial, Phosphoric Diester Hydrolases/metabolism | Enzymology |
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes |