Strain identifier
BacDive ID: 167291
Type strain: 
Species: Posidoniimonas corsicana
Strain Designation: KOR34
Strain history: <- P. Rast; KOR34 {2016} <- P. Rast, Leibniz-Institut DSMZ GmbH, Braunschweig, Germany; {2016}
NCBI tax ID(s): 1938618 (species)
General
@ref: 20215
BacDive-ID: 167291
DSM-Number: 104303
keywords: genome sequence, Bacteria, psychrophilic
description: Posidoniimonas corsicana KOR34 is a psychrophilic bacterium that was isolated from Sea Weed .
NCBI tax id
- NCBI tax id: 1938618
- Matching level: species
strain history
- @ref: 69063
- history: <- P. Rast; KOR34 {2016} <- P. Rast, Leibniz-Institut DSMZ GmbH, Braunschweig, Germany; {2016}
doi: 10.13145/bacdive167291.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/planctomycetota
- domain: Bacteria
- phylum: Planctomycetota
- class: Planctomycetia
- order: Pirellulales
- family: Lacipirellulaceae
- genus: Posidoniimonas
- species: Posidoniimonas corsicana
- full scientific name: Posidoniimonas corsicana Kohn et al. 2020
@ref: 20215
domain: Bacteria
phylum: Planctomycetota
class: Planctomycetia
order: Pirellulales
family: Lacipirellulaceae
genus: Posidoniimonas
species: Posidoniimonas corsicana
full scientific name: Posidoniimonas corsicana Kohn et al. 2020
strain designation: KOR34
type strain: yes
Morphology
multimedia
- @ref: 69063
- multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_104303.jpg
- caption: DSM 104303; scale bar represents 2 µm
- intellectual property rights: Leibniz-Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH
Culture and growth conditions
culture medium
- @ref: 69063
- name: PLANCTOMYCES MEDIUM (DSMZ Medium 1560)
- growth: yes
- link: https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium1560.pdf
culture temp
- @ref: 69063
- growth: positive
- type: growth
- temperature: 20
- range: psychrophilic
Isolation, sampling and environmental information
isolation
- @ref: 69063
- sample type: Sea Weed (Posedonia oceanica)
- geographic location: Island of Corse
- country: France
- origin.country: FRA
- continent: Europe
- latitude: 42.579
- longitude: 8.275
Sequence information
Genome sequences
- @ref: 66792
- description: Posidoniimonas corsicana KOR34
- accession: GCA_007859765
- assembly level: scaffold
- database: ncbi
- NCBI tax ID: 1938618
GC content
- @ref: 69063
- GC-content: 66.7
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| motile | yes | 83.13 | no |
| flagellated | no | 78.235 | no |
| gram-positive | no | 97.361 | no |
| anaerobic | no | 98.61 | no |
| aerobic | yes | 92.173 | no |
| halophile | no | 56.421 | no |
| spore-forming | no | 90.666 | no |
| glucose-util | yes | 92.76 | no |
| thermophile | no | 93.75 | yes |
| glucose-ferment | no | 88.564 | no |
External links
@ref: 20215
culture collection no.: DSM 104303, LMG 31362
straininfo link
- @ref: 114929
- straininfo: 402911
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69063 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-104303 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 104303) | |
| 114929 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID402911.1 |