Strain identifier

BacDive ID: 16696

Type strain: No

Species: Syntrophothermus lipocalidus

Strain Designation: TGB-C1/Delta H

Strain history: <- Y. Sekiguchi, Nagaoka Univ. Technology, Japan; TGB-C1/Delta H <- Y. Sekiguchi {1998}

NCBI tax ID(s): 86170 (species)

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General

@ref: 4791

BacDive-ID: 16696

DSM-Number: 12681

keywords: Bacteria, anaerobe, thermophilic

description: Syntrophothermus lipocalidus TGB-C1/Delta H is an anaerobe, thermophilic bacterium that was isolated from anaerobic granular sludge, thermophilic UASB reactor.

NCBI tax id

  • NCBI tax id: 86170
  • Matching level: species

strain history

  • @ref: 4791
  • history: <- Y. Sekiguchi, Nagaoka Univ. Technology, Japan; TGB-C1/Delta H <- Y. Sekiguchi {1998}

doi: 10.13145/bacdive16696.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Clostridia
  • order: Eubacteriales
  • family: Syntrophomonadaceae
  • genus: Syntrophothermus
  • species: Syntrophothermus lipocalidus
  • full scientific name: Syntrophothermus lipocalidus Sekiguchi et al. 2000

@ref: 4791

domain: Bacteria

phylum: Firmicutes

class: Clostridia

order: Clostridiales

family: Syntrophomonadaceae

genus: Syntrophothermus

species: Syntrophothermus lipocalidus

full scientific name: Syntrophothermus lipocalidus Sekiguchi et al. 2000

strain designation: TGB-C1/Delta H

type strain: no

Morphology

colony morphology

  • @ref: 4791
  • incubation period: 3-7 days

Culture and growth conditions

culture medium

  • @ref: 4791
  • name: SYNTROPHOTHERMUS MEDIUM (DSMZ Medium 870)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/870
  • composition: Name: SYNTROPHOTHERMUS MEDIUM (DSMZ Medium 870; with strain-specific modifications) Composition: Na-butyrate 2.17391 g/l Na2CO3 0.988142 g/l Crotonic acid 0.849802 g/l NH4Cl 0.533597 g/l L-Cysteine HCl x H2O 0.296443 g/l Na2S x 9 H2O 0.296443 g/l MgCl2 x 6 H2O 0.197628 g/l KH2PO4 0.13834 g/l MgSO4 x 7 H2O 0.00296443 g/l Nitrilotriacetic acid 0.00148221 g/l NaCl 0.000988142 g/l MnSO4 x H2O 0.000494071 g/l Sodium resazurin 0.000494071 g/l CoSO4 x 7 H2O 0.000177866 g/l ZnSO4 x 7 H2O 0.000177866 g/l FeSO4 x 7 H2O 9.88142e-05 g/l Pyridoxine hydrochloride 9.88142e-05 g/l CaCl2 x 2 H2O 9.88142e-05 g/l p-Aminobenzoic acid 4.94071e-05 g/l Calcium D-(+)-pantothenate 4.94071e-05 g/l Nicotinic acid 4.94071e-05 g/l (DL)-alpha-Lipoic acid 4.94071e-05 g/l Thiamine HCl 4.94071e-05 g/l Riboflavin 4.94071e-05 g/l NiCl2 x 6 H2O 2.96443e-05 g/l AlK(SO4)2 x 12 H2O 1.97628e-05 g/l Biotin 1.97628e-05 g/l Folic acid 1.97628e-05 g/l CuSO4 x 5 H2O 9.88142e-06 g/l H3BO3 9.88142e-06 g/l Na2MoO4 x 2 H2O 9.88142e-06 g/l Vitamin B12 9.88142e-07 g/l Na2WO4 x 2 H2O 3.95257e-07 g/l Na2SeO3 x 5 H2O 2.96443e-07 g/l NaOH Distilled water

culture temp

  • @ref: 4791
  • growth: positive
  • type: growth
  • temperature: 55
  • range: thermophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 4791
  • oxygen tolerance: anaerobe

Isolation, sampling and environmental information

isolation

  • @ref: 4791
  • sample type: anaerobic granular sludge, thermophilic UASB reactor
  • country: Japan
  • origin.country: JPN
  • continent: Asia

isolation source categories

Cat1Cat2Cat3
#Engineered#Biodegradation#Anaerobic digestor
#Engineered#Waste#Activated sludge
#Condition#Anoxic (anaerobic)
#Condition#Thermophilic (>45°C)

Safety information

risk assessment

  • @ref: 4791
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

External links

@ref: 4791

culture collection no.: DSM 12681

straininfo link

  • @ref: 85715
  • straininfo: 49342

Reference

@idauthorscataloguedoi/urltitle
4791Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 12681)https://www.dsmz.de/collection/catalogue/details/culture/DSM-12681
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
85715Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID49342.1StrainInfo: A central database for resolving microbial strain identifiers