General

@ref: 3796

BacDive-ID: 16669

DSM-Number: 10092

keywords: 16S sequence, Bacteria, anaerobe, mesophilic

description: Syntrophobacter pfennigii KoProp1 is an anaerobe, mesophilic bacterium that was isolated from anaerobic sewage sludge.

NCBI tax id

• NCBI tax id: 119485
• Matching level: species

strain history

• @ref: 3796
• history: <- B. Schink; KoProp1 <- E. Hauschild {1995}

doi: 10.13145/bacdive16669.20230509.8.1

Name and taxonomic classification

LPSN

• @ref: 20215
• description: domain/bacteria
• keyword: phylum/pseudomonadota
• domain: Bacteria
• phylum: Pseudomonadota
• class: Deltaproteobacteria
• order: Syntrophobacterales
• family: Syntrophobacteraceae
• genus: Syntrophobacter
• species: Syntrophobacter pfennigii
• full scientific name: Syntrophobacter pfennigii Wallrabenstein et al. 1996

• synonyms

  • @ref: 20215
  • synonym: Syntrophobacterium pfennigii

@ref: 3796

domain: Bacteria

phylum: Proteobacteria

class: Deltaproteobacteria

order: Syntrophobacterales

family: Syntrophobacteraceae

genus: Syntrophobacter

species: Syntrophobacter pfennigii

full scientific name: Syntrophobacter pfennigii Wallrabenstein et al. 1996

strain designation: KoProp1

type strain: yes

Culture and growth conditions

culture medium

• @ref: 3796
• name: ANAEROBIC FRESHWATER (FWM) MEDIUM (DSMZ Medium 503)
• growth: yes
• link: https://mediadive.dsmz.de/medium/503
• composition: Name: ANAEROBIC FRESHWATER (FWM) MEDIUM (DSMZ Medium 503; with strain-specific modifications) Composition: Na-propionate 1.49551 g/l Na2CO3 1.49551 g/l NaCl 0.997008 g/l Na2SO4 0.697906 g/l KCl 0.498505 g/l MgCl2 x 6 H2O 0.398803 g/l NH4Cl 0.249252 g/l KH2PO4 0.199402 g/l CaCl2 x 2 H2O 0.149552 g/l Na2S x 9 H2O 0.0997009 g/l HCl 0.00249252 g/l FeCl2 x 4 H2O 0.00149551 g/l Sodium resazurin 0.000498505 g/l NaOH 0.000498504 g/l Pyridoxine hydrochloride 0.000299103 g/l Nicotinic acid 0.000199402 g/l Thiamine-HCl x 2 H2O 0.000199402 g/l CoCl2 x 6 H2O 0.000189432 g/l Calcium pantothenate 9.97009e-05 g/l Vitamin B12 9.97009e-05 g/l MnCl2 x 4 H2O 9.97009e-05 g/l p-Aminobenzoic acid 7.97607e-05 g/l ZnCl2 6.97906e-05 g/l Na2MoO4 x 2 H2O 3.58923e-05 g/l NiCl2 x 6 H2O 2.39282e-05 g/l D-(+)-biotin 1.99402e-05 g/l H3BO3 5.98205e-06 g/l Na2WO4 x 2 H2O 3.98804e-06 g/l Na2SeO3 x 5 H2O 2.99103e-06 g/l CuCl2 x 2 H2O 1.99402e-06 g/l Distilled water

culture temp

• @ref: 3796
• growth: positive
• type: growth
• temperature: 30
• range: mesophilic

Physiology and metabolism

oxygen tolerance

• @ref: 3796
• oxygen tolerance: anaerobe

Isolation, sampling and environmental information

isolation

• @ref: 3796
• sample type: anaerobic sewage sludge
• geographic location: Konstanz
• country: Germany
• origin.country: DEU
• continent: Europe

isolation source categories

Safety information

risk assessment

• @ref: 3796
• biosafety level: 1
• biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

• @ref: 3796
• description: Syntrophobacter pfennigii 16S rRNA gene, strain KoProp1
• accession: X82875
• length: 1486
• database: ena
• NCBI tax ID: 119485

GC content

• @ref: 3796
• GC-content: 57.3
• method: high performance liquid chromatography (HPLC)

External links

@ref: 3796

culture collection no.: DSM 10092

straininfo link

• @ref: 85690
• straininfo: 48746

Reference