Archive BacDiveID:10.13145/bacdive16668.20230509.8.1

Strain identifier

BacDive ID: 16668

Type strain:

Species: Syntrophobacter wolinii

Strain Designation: 2805M

Strain history: <- E. Hauschild and B. Schink

NCBI tax ID(s): 29527 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.

General

@ref: 1135

BacDive-ID: 16668

DSM-Number: 102355

keywords: 16S sequence, Bacteria, anaerobe, mesophilic

description: Syntrophobacter wolinii 2805M is an anaerobe, mesophilic bacterium that was isolated from monoculture isolated from Syntrophobacter wolinii coculture DSM 2805T.

NCBI tax id

NCBI tax id: 29527
Matching level: species

strain history

@ref: 1135
history: <- E. Hauschild and B. Schink

doi: 10.13145/bacdive16668.20230509.8.1

Name and taxonomic classification

LPSN

@ref: 20215
description: domain/bacteria
keyword: phylum/pseudomonadota
domain: Bacteria
phylum: Pseudomonadota
class: Deltaproteobacteria
order: Syntrophobacterales
family: Syntrophobacteraceae
genus: Syntrophobacter
species: Syntrophobacter wolinii
full scientific name: Syntrophobacter wolinii Boone and Bryant 1984

@ref: 1135

domain: Bacteria

phylum: Proteobacteria

class: Deltaproteobacteria

order: Syntrophobacterales

family: Syntrophobacteraceae

genus: Syntrophobacter

species: Syntrophobacter wolinii

full scientific name: Syntrophobacter wolinii Boone and Bryant 1984

strain designation: 2805M

type strain: yes

Morphology

colony morphology

@ref: 1135
incubation period: 8-14 days

Culture and growth conditions

culture medium

@ref: 1135
name: PELOBACTER PROPIONICUS MEDIUM (FRESHWATER) (DSMZ Medium 298)
growth: yes
link: https://mediadive.dsmz.de/medium/298
composition: Name: PELOBACTER PROPIONICUS MEDIUM (FRESHWATER) (DSMZ Medium 298) Composition: Na2CO3 1.5 g/l NaCl 1.0 g/l 2,3-butanediol 0.9 g/l KCl 0.5 g/l MgCl2 x 6 H2O 0.4 g/l Na2S x 9 H2O 0.36 g/l NH4Cl 0.25 g/l KH2PO4 0.2 g/l CaCl2 x 2 H2O 0.15 g/l HCl 0.0025 g/l FeCl2 x 4 H2O 0.0015 g/l Sodium resazurin 0.0005 g/l CoCl2 x 6 H2O 0.00019 g/l MnCl2 x 4 H2O 0.0001 g/l ZnCl2 7e-05 g/l Na2MoO4 x 2 H2O 3.6e-05 g/l NiCl2 x 6 H2O 2.4e-05 g/l H3BO3 6e-06 g/l CuCl2 x 2 H2O 2e-06 g/l Distilled water

culture temp

@ref: 1135
growth: positive
type: growth
temperature: 30
range: mesophilic

Physiology and metabolism

oxygen tolerance

@ref: 1135
oxygen tolerance: anaerobe

Isolation, sampling and environmental information

isolation

@ref: 1135
sample type: monoculture isolated from Syntrophobacter wolinii coculture DSM 2805^T
host species: Syntrophobacter wolinii
country: USA
origin.country: USA
continent: North America

isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Laboratory	#Lab enrichment
#Host	#Microbial	#Bacteria

Safety information

risk assessment

@ref: 1135
biosafety level: 1
biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

@ref: 1135
description: S.wolinii 16S rRNA gene
accession: X70906
length: 1125
database: ena
NCBI tax ID: 29527

External links

@ref: 1135

culture collection no.: DSM 102355

straininfo link

@ref: 85689
straininfo: 402260

Reference

@id	authors	catalogue	doi/url	title
1135	Curators of the DSMZ	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 102355)	https://www.dsmz.de/collection/catalogue/details/culture/DSM-102355
20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.		10.1099/ijsem.0.004332	List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
85689	Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.		10.60712/SI-ID402260.1	StrainInfo: A central database for resolving microbial strain identifiers