Strain identifier
BacDive ID: 166043
Type strain: 
Species: Agromyces mediolanus
Strain history: K. Suzuki CNF208.
NCBI tax ID(s): 41986 (species)
version 8.1 (current version)
General
@ref: 67770
BacDive-ID: 166043
keywords: 16S sequence, Bacteria, mesophilic
description: Agromyces mediolanus JCM 9633 is a mesophilic bacterium that was isolated from Water filter.
NCBI tax id
- NCBI tax id: 41986
- Matching level: species
strain history
- @ref: 67770
- history: K. Suzuki CNF208.
doi: 10.13145/bacdive166043.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Micrococcales
- family: Microbacteriaceae
- genus: Agromyces
- species: Agromyces mediolanus
- full scientific name: Agromyces mediolanus (ex Mamoli 1939) Suzuki et al. 1996
@ref: 67770
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Micrococcales
family: Microbacteriaceae
genus: Agromyces
species: Agromyces mediolanus
full scientific name: Agromyces mediolanus Suzuki et al. 1996
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 30
- range: mesophilic
Physiology and metabolism
observation
- @ref: 67770
- observation: quinones: MK-12
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Water filter
taxonmaps
- @ref: 69479
- File name: preview.99_36836.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_9;96_3478;97_4265;98_27117;99_36836&stattab=map
- Last taxonomy: Agromyces mediolanus
- 16S sequence: LC064383
- Sequence Identity:
- Total samples: 6411
- soil counts: 3220
- aquatic counts: 780
- animal counts: 1854
- plant counts: 557
Sequence information
16S sequences
| @ref | description | accession | length | database | NCBI tax ID |
|---|---|---|---|---|---|
| 67770 | Agromyces mediolanus gene for 16S ribosomal RNA, strain: CNF208 | D45056 | 1466 | ena | 41986 |
| 67770 | Agromyces mediolanus gene for 16S ribosomal RNA, partial sequence, strain: JCM 9633 | LC064383 | 1447 | ena | 41986 |
GC content
- @ref: 67770
- GC-content: 72.3
- method: high performance liquid chromatography (HPLC)
External links
@ref: 67770
culture collection no.: JCM 9633
straininfo link
- @ref: 114737
- straininfo: 65933
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |
| 114737 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID65933.1 |