Strain identifier
BacDive ID: 165817
Type strain: 
Species: Capnocytophaga granulosa
Strain history: T. Yamamoto B0708.
NCBI tax ID(s): 45242 (species)
version 9 (current version)
General
@ref: 67770
BacDive-ID: 165817
keywords: 16S sequence, Bacteria
description: Capnocytophaga granulosa JCM 8564 is a bacterium that was isolated from Supragingival dental plaque.
NCBI tax id
- NCBI tax id: 45242
- Matching level: species
strain history
- @ref: 67770
- history: T. Yamamoto B0708.
doi: 10.13145/bacdive165817.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacteroidota
- domain: Bacteria
- phylum: Bacteroidota
- class: Flavobacteriia
- order: Flavobacteriales
- family: Flavobacteriaceae
- genus: Capnocytophaga
- species: Capnocytophaga granulosa
- full scientific name: Capnocytophaga granulosa Yamamoto et al. 1994
@ref: 67770
domain: Bacteria
phylum: Bacteroidetes
class: Flavobacteriia
order: Flavobacteriales
family: Flavobacteriaceae
genus: Capnocytophaga
species: Capnocytophaga granulosa
full scientific name: Capnocytophaga granulosa Yamamoto et al. 1994
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 37
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Supragingival dental plaque
taxonmaps
- @ref: 69479
- File name: preview.99_332.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_15818;96_232;97_254;98_283;99_332&stattab=map
- Last taxonomy: Capnocytophaga granulosa subclade
- 16S sequence: LC019779
- Sequence Identity:
- Total samples: 5552
- soil counts: 52
- aquatic counts: 96
- animal counts: 5351
- plant counts: 53
Sequence information
16S sequences
- @ref: 67770
- description: Capnocytophaga granulosa gene for 16S ribosomal RNA, partial sequence, strain: JCM 8564
- accession: LC019779
- length: 1473
- database: nuccore
- NCBI tax ID: 45242
External links
@ref: 67770
culture collection no.: JCM 8564
straininfo link
- @ref: 114640
- straininfo: 65494
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |
| 114640 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID65494.1 |