Strain identifier
BacDive ID: 165776
Type strain:
Species: Aeromonas salmonicida subsp. masoucida
Strain history: M. Yoshinaga AR 306.
NCBI tax ID(s): 197700 (subspecies)
version 8.1 (current version)
General
@ref: 67770
BacDive-ID: 165776
keywords: 16S sequence, Bacteria, mesophilic
description: Aeromonas salmonicida subsp. masoucida JCM 8235 is a mesophilic bacterium that was isolated from Masou .
NCBI tax id
- NCBI tax id: 197700
- Matching level: subspecies
strain history
- @ref: 67770
- history: M. Yoshinaga AR 306.
doi: 10.13145/bacdive165776.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Aeromonadales
- family: Aeromonadaceae
- genus: Aeromonas
- species: Aeromonas salmonicida subsp. masoucida
- full scientific name: Aeromonas salmonicida subsp. masoucida Kimura 1969 (Approved Lists 1980)
@ref: 67770
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Aeromonadales
family: Aeromonadaceae
genus: Aeromonas
species: Aeromonas salmonicida subsp. masoucida
full scientific name: Aeromonas salmonicida subsp. masoucida Kimura 1969
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 25
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Masou (Oncorhynchus sp.)
- host species: Oncorhynchus sp.
taxonmaps
- @ref: 69479
- File name: preview.99_485.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_11;96_15;97_15;98_18;99_485&stattab=map
- Last taxonomy: Aeromonas
- 16S sequence: LC505490
- Sequence Identity:
- Total samples: 313
- soil counts: 16
- aquatic counts: 156
- animal counts: 131
- plant counts: 10
Sequence information
16S sequences
- @ref: 67770
- description: Aeromonas salmonicida subsp. masoucida JCM 8235 gene for 16S ribosomal RNA, partial sequence
- accession: LC505490
- length: 1467
- database: ena
- NCBI tax ID: 197700
External links
@ref: 67770
culture collection no.: JCM 8235
straininfo link
- @ref: 114601
- straininfo: 65306
Reference
@id | authors | title | doi/url |
---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |
114601 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID65306.1 |