Strain identifier
BacDive ID: 165773
Type strain: 
Species: Bifidobacterium ruminantium
Strain history: B. Biavati Ru728.
NCBI tax ID(s): 78346 (species)
version 9 (current version)
General
@ref: 67770
BacDive-ID: 165773
keywords: 16S sequence, Bacteria
description: Bifidobacterium ruminantium JCM 8221 is a bacterium that was isolated from Bovine rumen.
NCBI tax id
- NCBI tax id: 78346
- Matching level: species
strain history
- @ref: 67770
- history: B. Biavati Ru728.
doi: 10.13145/bacdive165773.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Bifidobacteriales
- family: Bifidobacteriaceae
- genus: Bifidobacterium
- species: Bifidobacterium ruminantium
- full scientific name: Bifidobacterium ruminantium Biavati and Mattarelli 1991
@ref: 67770
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Bifidobacteriales
family: Bifidobacteriaceae
genus: Bifidobacterium
species: Bifidobacterium ruminantium
full scientific name: Bifidobacterium ruminantium Biavati and Mattarelli 1991
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 37
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Bovine rumen
Sequence information
16S sequences
| @ref | description | accession | length | database | NCBI tax ID |
|---|---|---|---|---|---|
| 124043 | Bifidobacterium ruminantium gene for 16S rRNA, partial sequence, strain: JCM 8221. | AB116346 | 478 | nuccore | 78346 |
| 124043 | Bifidobacterium ruminantium gene for 16S rRNA, partial sequence, strain: JCM 8221. | AB507150 | 693 | nuccore | 78346 |
GC content
- @ref: 67770
- GC-content: 57
- method: thermal denaturation, midpoint method (Tm)
External links
@ref: 67770
culture collection no.: JCM 8221, LMG 18895
straininfo link
- @ref: 114598
- straininfo: 12473
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
| 114598 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID12473.1 |
| 124043 | Dr. Isabel Schober, Dr. Julia Koblitz | Data extracted from sequence databases, automatically matched based on designation and taxonomy |