Strain identifier
BacDive ID: 165479
Type strain: 
Species: Bifidobacterium choerinum
Strain history: Y. Benno <-- T. Mitsuoka IV-82 (PNB-3-5).
NCBI tax ID(s): 35760 (species)
version 8.1 (current version)
General
@ref: 67770
BacDive-ID: 165479
keywords: 16S sequence, Bacteria, mesophilic
description: Bifidobacterium choerinum JCM 7082 is a mesophilic bacterium that was isolated from Pig feces.
NCBI tax id
- NCBI tax id: 35760
- Matching level: species
strain history
- @ref: 67770
- history: Y. Benno <-- T. Mitsuoka IV-82 (PNB-3-5).
doi: 10.13145/bacdive165479.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Bifidobacteriales
- family: Bifidobacteriaceae
- genus: Bifidobacterium
- species: Bifidobacterium choerinum
- full scientific name: Bifidobacterium choerinum Scardovi et al. 1979 (Approved Lists 1980)
@ref: 67770
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Bifidobacteriales
family: Bifidobacteriaceae
genus: Bifidobacterium
species: Bifidobacterium choerinum
full scientific name: Bifidobacterium choerinum Scardovi et al. 1979
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Pig feces
taxonmaps
- @ref: 69479
- File name: preview.99_5739.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_24;96_259;97_3388;98_4273;99_5739&stattab=map
- Last taxonomy: Bifidobacterium
- 16S sequence: LC269352
- Sequence Identity:
- Total samples: 42281
- soil counts: 410
- aquatic counts: 231
- animal counts: 41508
- plant counts: 132
Sequence information
16S sequences
- @ref: 67770
- description: Bifidobacterium choerinum gene for 16S ribosomal RNA, partial sequence, strain: JCM 7082
- accession: LC269352
- length: 1477
- database: ena
- NCBI tax ID: 35760
External links
@ref: 67770
culture collection no.: JCM 7082
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |