Strain identifier
BacDive ID: 165359
Type strain: 
Species: Comamonas testosteroni
Strain history: J. Tamaoka KS 0005 <-- AJ 2002 <-- IAM 1048 <-- K. Arima P-8-2.
NCBI tax ID(s): 285 (species)
version 9 (current version)
General
@ref: 67770
BacDive-ID: 165359
keywords: 16S sequence, Bacteria
description: Comamonas testosteroni JCM 6204 is a bacterium of the family Comamonadaceae.
NCBI tax id
- NCBI tax id: 285
- Matching level: species
strain history
- @ref: 67770
- history: J. Tamaoka KS 0005 <-- AJ 2002 <-- IAM 1048 <-- K. Arima P-8-2.
doi: 10.13145/bacdive165359.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Betaproteobacteria
- order: Burkholderiales
- family: Comamonadaceae
- genus: Comamonas
- species: Comamonas testosteroni
- full scientific name: Comamonas testosteroni (Marcus and Talalay 1956) Tamaoka et al. 1987
synonyms
- @ref: 20215
- synonym: Pseudomonas testosteroni
@ref: 67770
domain: Bacteria
phylum: Proteobacteria
class: Betaproteobacteria
order: Burkholderiales
family: Comamonadaceae
genus: Comamonas
species: Comamonas testosteroni
full scientific name: Comamonas testosteroni (Marcus and Talalay 1956) Tamaoka et al. 1987
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 30
Physiology and metabolism
observation
- @ref: 67770
- observation: quinones: Q-8
Isolation, sampling and environmental information
taxonmaps
- @ref: 69479
- File name: preview.99_294.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_1;96_202;97_220;98_249;99_294&stattab=map
- Last taxonomy: Comamonas
- 16S sequence: LC379110
- Sequence Identity:
- Total samples: 45208
- soil counts: 5571
- aquatic counts: 17183
- animal counts: 18603
- plant counts: 3851
Sequence information
16S sequences
| @ref | description | accession | length | database | NCBI tax ID |
|---|---|---|---|---|---|
| 67770 | Comamonas testosteroni gene for 16S rRNA, partial sequence, strain: JCM 6204 | LC379110 | 1455 | nuccore | 285 |
| 124043 | Comamonas testosteroni gene for 16S rRNA, partial sequence, strain: NBRC 12047. | AB680219 | 1458 | nuccore | 285 |
| 124043 | Comamonas testosteroni strain BCRC 10956 16S-23S ribosomal RNA intergenic spacer, complete sequence. | EU014545 | 749 | nuccore | 285 |
GC content
- @ref: 67770
- GC-content: 61.9
- method: high performance liquid chromatography (HPLC)
External links
@ref: 67770
culture collection no.: JCM 6204, BCRC 10956, IAM 1048, IFO 12047, NBRC 12047
straininfo link
- @ref: 114430
- straininfo: 60289
literature
- topic: Metabolism
- Pubmed-ID: 9163947
- title: D-lysine production from L-lysine by successive chemical racemization and microbial asymmetric degradation.
- authors: Takahashi E, Furui M, Seko H, Shibatani T
- journal: Appl Microbiol Biotechnol
- DOI: 10.1007/s002530050938
- year: 1997
- mesh: Biodegradation, Environmental, Chromatography, Ion Exchange, Gram-Negative Bacteria/*metabolism, Heating, Hydrogen-Ion Concentration, *Isomerism, Lysine/isolation & purification/*metabolism, Yeasts/*metabolism
- topic2: Biotechnology
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |
| 114430 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID60289.1 |
| 124043 | Dr. Isabel Schober, Dr. Julia Koblitz | Data extracted from sequence databases, automatically matched based on designation and taxonomy |