Strain identifier
BacDive ID: 165343
Type strain: 
Species: Kurthia zopfii
Strain history: R. M. Keddie K76.
NCBI tax ID(s): 1650 (species)
version 8.1 (current version)
General
@ref: 67770
BacDive-ID: 165343
keywords: 16S sequence, Bacteria, mesophilic
description: Kurthia zopfii JCM 6103 is a mesophilic bacterium that was isolated from Pig faeces.
NCBI tax id
- NCBI tax id: 1650
- Matching level: species
strain history
- @ref: 67770
- history: R. M. Keddie K76.
doi: 10.13145/bacdive165343.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Caryophanales
- family: Caryophanaceae
- genus: Kurthia
- species: Kurthia zopfii
- full scientific name: Kurthia zopfii (Kurth 1883) Trevisan 1885 (Approved Lists 1980)
synonyms
- @ref: 20215
- synonym: Bacterium zopfii
@ref: 67770
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Caryophanales
family: Caryophanaceae
genus: Kurthia
species: Kurthia zopfii
full scientific name: Kurthia zopfii (Kurth 1883) Trevisan 1885
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 30
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Pig faeces
taxonmaps
- @ref: 69479
- File name: preview.99_51294.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_3;96_393;97_1161;98_36831;99_51294&stattab=map
- Last taxonomy: Kurthia zopfii subclade
- 16S sequence: LC379105
- Sequence Identity:
- Total samples: 1957
- soil counts: 206
- aquatic counts: 206
- animal counts: 1454
- plant counts: 91
Sequence information
16S sequences
- @ref: 67770
- description: Kurthia zopfii gene for 16S rRNA, partial sequence, strain: JCM 6103
- accession: LC379105
- length: 1476
- database: ena
- NCBI tax ID: 1650
GC content
- @ref: 67770
- GC-content: 37.1-37.3
- method: thermal denaturation, midpoint method (Tm)
External links
@ref: 67770
culture collection no.: JCM 6103
straininfo link
- @ref: 114420
- straininfo: 64782
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |
| 114420 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID64782.1 |