Strain identifier
BacDive ID: 16528
Type strain: 
Species: Microbispora corallina
Strain Designation: DF-28
Strain history: V. Kitpreechavanich DF-28.
NCBI tax ID(s): 83302 (species)
version 8.1 (current version)
General
@ref: 11996
BacDive-ID: 16528
DSM-Number: 44681
keywords: Bacteria, mesophilic
description: Microbispora corallina DF-28 is a mesophilic bacterium that was isolated from soil sample.
NCBI tax id
- NCBI tax id: 83302
- Matching level: species
strain history
| @ref | history |
|---|---|
| 11996 | <- JCM <- V. Kitpreechavanich; DF-28 |
| 67770 | V. Kitpreechavanich DF-28. |
doi: 10.13145/bacdive16528.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Streptosporangiales
- family: Streptosporangiaceae
- genus: Microbispora
- species: Microbispora corallina
- full scientific name: Microbispora corallina Nakajima et al. 1999
@ref: 11996
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Streptosporangiaceae
genus: Microbispora
species: Microbispora corallina
full scientific name: Microbispora corallina Nakajima et al. 1999
strain designation: DF-28
type strain: no
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 11996 | ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) | yes | https://mediadive.dsmz.de/medium/84 | Name: ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84; with strain-specific modifications) Composition: Agar 20.0 g/l Rolled oats 20.0 g/l Yeast 1.0 g/l ZnSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l FeSO4 x 7 H2O 0.001 g/l Distilled water |
| 11996 | STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252) | yes | https://mediadive.dsmz.de/medium/252 | Name: STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252) Composition: Agar 14.985 g/l Starch 9.99001 g/l (NH4)2SO4 1.998 g/l CaCO3 1.998 g/l K2HPO4 0.999001 g/l MgSO4 x 7 H2O 0.999001 g/l NaCl 0.999001 g/l FeSO4 x 7 H2O 0.000999001 g/l MnCl2 x 4 H2O 0.000999001 g/l ZnSO4 x 7 H2O 0.000999001 g/l Distilled water |
culture temp
| @ref | growth | type | temperature | range |
|---|---|---|---|---|
| 11996 | positive | growth | 28 | mesophilic |
| 67770 | positive | growth | 28 | mesophilic |
Physiology and metabolism
observation
- @ref: 67770
- observation: quinones: MK-9(III,VIII-H4), MK-9(H2), MK-9
Isolation, sampling and environmental information
isolation
| @ref | sample type | country | origin.country | continent |
|---|---|---|---|---|
| 11996 | soil sample | Thailand | THA | Asia |
| 67770 | Soil at a deciduous dipterocarp forest | Thailand | THA | Asia |
isolation source categories
- Cat1: #Environmental
- Cat2: #Terrestrial
- Cat3: #Soil
Safety information
risk assessment
- @ref: 11996
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
GC content
| @ref | GC-content | method |
|---|---|---|
| 11996 | 71-72 | |
| 67770 | 71.2 | high performance liquid chromatography (HPLC) |
External links
@ref: 11996
culture collection no.: DSM 44681, JCM 10266
straininfo link
- @ref: 85559
- straininfo: 111439
literature
- topic: Phylogeny
- Pubmed-ID: 10555358
- title: Microbispora corallina sp. nov., a new species of the genus Microbispora isolated from Thai soil.
- authors: Nakajima Y, Kitpreechavanich V, Suzuki K, Kudo T
- journal: Int J Syst Bacteriol
- DOI: 10.1099/00207713-49-4-1761
- year: 1999
- mesh: Actinomycetales/*classification/cytology/isolation & purification/physiology, Bacterial Typing Techniques, DNA, Bacterial/genetics, Fatty Acids/analysis, Genes, rRNA, Molecular Sequence Data, Nucleic Acid Hybridization, Phylogeny, Polymerase Chain Reaction, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, *Soil Microbiology, Thailand, Trees
- topic2: Genetics
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 11996 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 44681) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-44681 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||
| 85559 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID111439.1 | StrainInfo: A central database for resolving microbial strain identifiers |