Strain identifier
BacDive ID: 164998
Type strain: 
Species: Streptomyces noursei
Strain history: KCC S-0701 <-- H. Yonehara 8054-MC3.
NCBI tax ID(s): 1971 (species)
version 9.3 (current version)
General
@ref: 67770
BacDive-ID: 164998
keywords: genome sequence, Bacteria, spore-forming, mesophilic
description: Streptomyces noursei JCM 4701 is a spore-forming, mesophilic bacterium that was isolated from Soil.
NCBI tax id
- NCBI tax id: 1971
- Matching level: species
strain history
- @ref: 67770
- history: KCC S-0701 <-- H. Yonehara 8054-MC3.
doi: 10.13145/bacdive164998.20250331.9.3
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Kitasatosporales
- family: Streptomycetaceae
- genus: Streptomyces
- species: Streptomyces noursei
- full scientific name: Streptomyces noursei Brown et al. 1953 (Approved Lists 1980)
synonyms
- @ref: 20215
- synonym: Streptomyces albulus
@ref: 67770
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Streptomycetales
family: Streptomycetaceae
genus: Streptomyces
species: Streptomyces noursei
full scientific name: Streptomyces noursei Brown et al. 1953
type strain: no
Morphology
cell morphology
| @ref | gram stain | confidence | motility |
|---|---|---|---|
| 125439 | positive | 97.9 | |
| 125439 | 90.8 | no |
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 28
Physiology and metabolism
oxygen tolerance
- @ref: 125439
- oxygen tolerance: obligate aerobe
- confidence: 97.4
spore formation
| @ref | spore formation | confidence |
|---|---|---|
| 125438 | yes | 90.236 |
| 125439 | yes | 95.4 |
metabolite production
- @ref: 67770
- metabolite: nitraminoacetic acid
- production: yes
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Soil
- geographic location: campus of the University of Tokyo, Tokyo
- country: Japan
- origin.country: JPN
- continent: Asia
Sequence information
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Streptomyces noursei strain JCM 4701 | 1971.3 | wgs | patric | 1971 |
| 67770 | Streptomyces noursei JCM 4701 | GCA_002891315 | scaffold | ncbi | 1971 |
Genome-based predictions
predictions
| @ref | model | trait | description | prediction | confidence | training_data |
|---|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positive | Positive reaction to Gram-staining | yes | 88.975 | no |
| 125438 | anaerobic | anaerobic | Ability to grow under anoxygenic conditions (including facultative anaerobes) | no | 90.055 | no |
| 125438 | spore-forming | spore-forming | Ability to form endo- or exospores | yes | 90.236 | no |
| 125438 | aerobic | aerobic | Ability to grow under oxygenic conditions (including facultative aerobes) | yes | 89.496 | no |
| 125438 | thermophile | thermophilic | Ability to grow at temperatures above or equal to 45°C | no | 94.5 | no |
| 125438 | motile2+ | flagellated | Ability to perform flagellated movement | no | 86.6 | no |
| 125439 | BacteriaNet | spore_formation | Ability to form endo- or exospores | yes | 95.4 | |
| 125439 | BacteriaNet | motility | Ability to perform movement | no | 90.8 | |
| 125439 | BacteriaNet | gram_stain | Reaction to gram-staining | positive | 97.9 | |
| 125439 | BacteriaNet | oxygen_tolerance | Oxygenic conditions needed for growth | obligate aerobe | 97.4 |
External links
@ref: 67770
culture collection no.: JCM 4701
straininfo link
- @ref: 114360
- straininfo: 64374
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
| 114360 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID64374.1 |
| 125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann | Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets | 10.1101/2024.08.12.607695 |
| 125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy | deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 | https://github.com/GenomeNet/deepG |