Strain identifier
BacDive ID: 164938
Type strain: 
Species: Streptomyces virginiae
Strain history: KCC S-0093 <-- H. Yonehara <-- ATU <-- Abbott Labs.; NA255-M25.
NCBI tax ID(s): 1961 (species)
version 9 (current version)
General
@ref: 67770
BacDive-ID: 164938
keywords: 16S sequence, Bacteria
description: Streptomyces virginiae JCM 4093 is a bacterium that was isolated from Soil.
NCBI tax id
- NCBI tax id: 1961
- Matching level: species
strain history
- @ref: 67770
- history: KCC S-0093 <-- H. Yonehara <-- ATU <-- Abbott Labs.; NA255-M25.
doi: 10.13145/bacdive164938.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Kitasatosporales
- family: Streptomycetaceae
- genus: Streptomyces
- species: Streptomyces virginiae
- full scientific name: Streptomyces virginiae Grundy et al. 1952 (Approved Lists 1980)
synonyms
- @ref: 20215
- synonym: Streptomyces cinnamonensis
@ref: 67770
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Streptomycetales
family: Streptomycetaceae
genus: Streptomyces
species: Streptomyces virginiae
full scientific name: Streptomyces virginiae Grundy et al. 1952
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 28
Physiology and metabolism
metabolite production
- @ref: 67770
- metabolite: mycobacidin
- production: yes
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Soil
- geographic location: near Roanoke, VA
- country: USA
- origin.country: USA
- continent: North America
taxonmaps
- @ref: 69479
- File name: preview.99_163.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_15;96_102;97_109;98_144;99_163&stattab=map
- Last taxonomy: Streptomyces
- 16S sequence: AB184758
- Sequence Identity:
- Total samples: 26399
- soil counts: 19336
- aquatic counts: 1680
- animal counts: 1702
- plant counts: 3681
Sequence information
16S sequences
| @ref | description | accession | length | database | NCBI tax ID |
|---|---|---|---|---|---|
| 67770 | Streptomyces virginiae gene for 16S rRNA, partial sequence, strain: NBRC 3392 | AB184758 | 1475 | nuccore | 1961 |
| 67770 | Streptomyces virginiae DNA for 16S rRNA, strain IFO 3392 | D85118 | 1514 | nuccore | 1961 |
External links
@ref: 67770
culture collection no.: JCM 4093, IFO 3392, NBRC 3392
straininfo link
- @ref: 114344
- straininfo: 265316
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |
| 114344 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID265316.1 |