Strain identifier
BacDive ID: 164785
Type strain: 
Species: Fusobacterium varium
Strain history: T. Shinjo Fn 520 (Biovar C) <-- H. Beerens 410.
NCBI tax ID(s): 856 (species)
version 8.1 (current version)
General
@ref: 67770
BacDive-ID: 164785
keywords: 16S sequence, Bacteria, mesophilic
description: Fusobacterium varium JCM 3721 is a mesophilic bacterium that was isolated from Bovine feces.
NCBI tax id
- NCBI tax id: 856
- Matching level: species
strain history
- @ref: 67770
- history: T. Shinjo Fn 520 (Biovar C) <-- H. Beerens 410.
doi: 10.13145/bacdive164785.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/fusobacteriota
- domain: Bacteria
- phylum: Fusobacteriota
- class: Fusobacteriia
- order: Fusobacteriales
- family: Fusobacteriaceae
- genus: Fusobacterium
- species: Fusobacterium varium
- full scientific name: Fusobacterium varium (Eggerth and Gagnon 1933) Moore and Holdeman 1969 (Approved Lists 1980)
synonyms
@ref synonym 20215 Fusobacterium pseudonecrophorum 20215 Bacteroides varius
@ref: 67770
domain: Bacteria
phylum: Fusobacteria
class: Fusobacteriia
order: Fusobacteriales
family: Fusobacteriaceae
genus: Fusobacterium
species: Fusobacterium varium
full scientific name: Fusobacterium varium (Eggerth and Gagnon 1933) Moore and Holdeman 1969
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Bovine feces
taxonmaps
- @ref: 69479
- File name: preview.99_1233.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_140;96_717;97_839;98_975;99_1233&stattab=map
- Last taxonomy: Fusobacterium
- 16S sequence: AB971801
- Sequence Identity:
- Total samples: 54826
- soil counts: 1169
- aquatic counts: 2796
- animal counts: 50429
- plant counts: 432
Sequence information
16S sequences
- @ref: 67770
- description: Fusobacterium varium gene for 16S ribosomal RNA, partial sequence, strain: JCM 3721
- accession: AB971801
- length: 1469
- database: ena
- NCBI tax ID: 856
GC content
- @ref: 67770
- GC-content: 28
- method: thermal denaturation, midpoint method (Tm)
External links
@ref: 67770
culture collection no.: JCM 3721
straininfo link
- @ref: 114216
- straininfo: 64137
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |
| 114216 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID64137.1 |