Strain identifier

BacDive ID: 164781

Type strain: No

Species: Fusobacterium necrophorum subsp. necrophorum

Strain history: T. Shinjo Fn 43 (Biovar A).

NCBI tax ID(s): 143388 (subspecies)

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General

@ref: 67770

BacDive-ID: 164781

keywords: 16S sequence, Bacteria, mesophilic

description: Fusobacterium necrophorum subsp. necrophorum JCM 3716 is a mesophilic bacterium that was isolated from Bovine liver abscess.

NCBI tax id

  • NCBI tax id: 143388
  • Matching level: subspecies

strain history

  • @ref: 67770
  • history: T. Shinjo Fn 43 (Biovar A).

doi: 10.13145/bacdive164781.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/fusobacteriota
  • domain: Bacteria
  • phylum: Fusobacteriota
  • class: Fusobacteriia
  • order: Fusobacteriales
  • family: Fusobacteriaceae
  • genus: Fusobacterium
  • species: Fusobacterium necrophorum subsp. necrophorum
  • full scientific name: Fusobacterium necrophorum subsp. necrophorum (Flügge 1886) Shinjo et al. 1991 (Approved Lists 1980)

@ref: 67770

domain: Bacteria

phylum: Fusobacteria

class: Fusobacteriia

order: Fusobacteriales

family: Fusobacteriaceae

genus: Fusobacterium

species: Fusobacterium necrophorum subsp. necrophorum

full scientific name: Fusobacterium necrophorum subsp. necrophorum (Flgge 1886) Shinjo et al. 1991

type strain: no

Culture and growth conditions

culture temp

  • @ref: 67770
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 67770
  • sample type: Bovine liver abscess

taxonmaps

  • @ref: 69479
  • File name: preview.99_1526.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_140;96_874;97_1022;98_1205;99_1526&stattab=map
  • Last taxonomy: Fusobacterium necrophorum
  • 16S sequence: AB971800
  • Sequence Identity:
  • Total samples: 30069
  • soil counts: 1769
  • aquatic counts: 1051
  • animal counts: 26978
  • plant counts: 271

Sequence information

16S sequences

  • @ref: 67770
  • description: Fusobacterium necrophorum subsp. necrophorum gene for 16S ribosomal RNA, partial sequence, strain: JCM 3716
  • accession: AB971800
  • length: 1469
  • database: ena
  • NCBI tax ID: 143388

GC content

  • @ref: 67770
  • GC-content: 31.4
  • method: thermal denaturation, midpoint method (Tm)

External links

@ref: 67770

culture collection no.: JCM 3716

straininfo link

  • @ref: 114212
  • straininfo: 64134

Reference

@idauthorstitledoi/url
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/
114212Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID64134.1