General

@ref: 67770

BacDive-ID: 164653

keywords: genome sequence, 16S sequence, Bacteria

description: Aeromicrobium yanjiei JCM 33790 is a bacterium that was isolated from Intestinal contents of plateau pika collected from the Qinghai-Tibet Plateau.

NCBI tax id

• NCBI tax id: 2662028
• Matching level: species

strain history

• @ref: 67770
• history: J. Yang; Natl. Inst. for Commun. Dis. Control & Prev., China CDC, China; MF47.

doi: 10.13145/bacdive164653.20240510.9

Name and taxonomic classification

LPSN

• @ref: 20215
• description: domain/bacteria
• keyword: phylum/actinomycetota
• domain: Bacteria
• phylum: Actinomycetota
• class: Actinomycetes
• order: Propionibacteriales
• family: Nocardioidaceae
• genus: Aeromicrobium
• species: Aeromicrobium yanjiei
• full scientific name: Aeromicrobium yanjiei Li et al. 2020

@ref: 67770

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Propionibacteriales

family: Nocardioidaceae

genus: Aeromicrobium

species: Aeromicrobium yanjiei

full scientific name: Aeromicrobium yanjiei Li et al. 2020

type strain: yes

Culture and growth conditions

culture temp

• @ref: 67770
• growth: positive
• type: growth
• temperature: 28

Physiology and metabolism

observation

• @ref: 67770
• observation: quinones: MK-9(H₄), MK-8(H₄)

Isolation, sampling and environmental information

isolation

• @ref: 67770
• sample type: Intestinal contents of plateau pika collected from the Qinghai-Tibet Plateau
• country: China
• origin.country: CHN
• continent: Asia

Sequence information

16S sequences

• @ref: 67770
• description: Aeromicrobium yanjiei strain MF47 16S ribosomal RNA gene, partial sequence
• accession: MN421549
• length: 1482
• database: nuccore
• NCBI tax ID: 2662028

Genome sequences

• @ref: 67770
• description: Aeromicrobium yanjiei MF47
• accession: GCA_009649075
• assembly level: complete
• database: ncbi
• NCBI tax ID: 2662028

GC content

• @ref: 67770
• GC-content: 69.8
• method: genome sequence analysis

External links

@ref: 67770

culture collection no.: JCM 33790, CGMCC 1.17444

literature

• topic: Phylogeny
• Pubmed-ID: 32692642
• title: Aeromicrobium chenweiae sp. nov. and Aeromicrobium yanjiei sp. nov., isolated from Tibetan antelope (Pantholops hodgsonii) and plateau pika (Ochotona curzoniae), respectively.
• authors: Li J, Lei W, Yang J, Lu S, Jin D, Lai XH, Zhang S, Cheng Y, Mi F, Huang Y, Pu J, Dong K, Tian Z, Wu X, Huang Y, Wang S, Xu J
• journal: Int J Syst Evol Microbiol
• DOI: 10.1099/ijsem.0.004331
• year: 2020
• mesh: Actinobacteria/*classification/isolation & purification, Animals, Antelopes/*microbiology, Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Diaminopimelic Acid/chemistry, Fatty Acids/chemistry, Feces/microbiology, Lagomorpha/*microbiology, Nucleic Acid Hybridization, Peptidoglycan/chemistry, Phospholipids/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Tibet, Vitamin K 2/analogs & derivatives/chemistry
• topic2: Transcriptome

Reference