Strain identifier
BacDive ID: 164641
Type strain: 
Species: Terrilactibacillus tamarindi
Strain history: S. Tanasupawat; Chulalongkorn Univ., Thailand; BCM23-1.
NCBI tax ID(s): 2599694 (species)
General
@ref: 67770
BacDive-ID: 164641
keywords: genome sequence, 16S sequence, Bacteria, mesophilic
description: Terrilactibacillus tamarindi JCM 33748 is a mesophilic bacterium that was isolated from Bark of Tamarindus indica in Chiang Mai Province.
NCBI tax id
- NCBI tax id: 2599694
- Matching level: species
strain history
- @ref: 67770
- history: S. Tanasupawat; Chulalongkorn Univ., Thailand; BCM23-1.
doi: 10.13145/bacdive164641.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Caryophanales
- family: Bacillaceae
- genus: Terrilactibacillus
- species: Terrilactibacillus tamarindi
- full scientific name: Terrilactibacillus tamarindi Kingkaew et al. 2020
@ref: 67770
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Caryophanales
family: Bacillaceae
genus: Terrilactibacillus
species: Terrilactibacillus tamarindi
full scientific name: Terrilactibacillus tamarindi Kingkaew et al. 2020
type strain: yes
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 30
- range: mesophilic
Physiology and metabolism
observation
- @ref: 67770
- observation: quinones: MK-7
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Bark of Tamarindus indica in Chiang Mai Province
- host species: Tamarindus indica
- country: Thailand
- origin.country: THA
- continent: Asia
Sequence information
16S sequences
- @ref: 67770
- description: Terrilactibacillus sp. BCM23-1 gene for 16S ribosomal RNA, partial sequence
- accession: LC494102
- length: 1436
- database: ena
- NCBI tax ID: 2599694
Genome sequences
- @ref: 67770
- description: Terrilactibacillus tamarindi BCM23-1
- accession: GCA_009718825
- assembly level: contig
- database: ncbi
- NCBI tax ID: 2599694
GC content
- @ref: 67770
- GC-content: 37.1
- method: genome sequence analysis
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| motile | yes | 86.07 | no |
| flagellated | yes | 82.396 | no |
| gram-positive | yes | 91.983 | no |
| anaerobic | no | 97.994 | no |
| aerobic | yes | 51.943 | no |
| halophile | yes | 59.391 | no |
| spore-forming | yes | 94.935 | no |
| glucose-util | yes | 89.265 | no |
| thermophile | no | 93.975 | yes |
| glucose-ferment | no | 71.806 | no |
External links
@ref: 67770
culture collection no.: JCM 33748, LMG 31662, TISTR 2841
literature
- topic: Phylogeny
- Pubmed-ID: 32519940
- title: Terrilactibacillus tamarindi sp. nov., isolated from bark of Tamarindus indica.
- authors: Kingkaew E, Nuhwa R, Piluk J, Thitiprasert S, Thongchul N, Tanasupawat S
- journal: Int J Syst Evol Microbiol
- DOI: 10.1099/ijsem.0.004261
- year: 2020
- mesh: Bacillaceae/*classification/isolation & purification, Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Diaminopimelic Acid/chemistry, Fatty Acids/chemistry, Nucleic Acid Hybridization, Peptidoglycan/chemistry, Phospholipids/chemistry, *Phylogeny, Plant Bark/*microbiology, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Tamarindus/*microbiology, Thailand, Vitamin K 2/analogs & derivatives/chemistry
- topic2: Transcriptome
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ |