General

@ref: 67770

BacDive-ID: 164594

keywords: genome sequence, 16S sequence, Bacteria, mesophilic

description: Jiangella asiatica JCM 33518 is a mesophilic bacterium that was isolated from Soil from the Karakum Desert.

NCBI tax id

• NCBI tax id: 2530372
• Matching level: species

strain history

• @ref: 67770
• history: N. Sahin; Ondokuz Mayis Univ., Turkey; 5K138.

doi: 10.13145/bacdive164594.20230509.8.1

Name and taxonomic classification

LPSN

• @ref: 20215
• description: domain/bacteria
• keyword: phylum/actinomycetota
• domain: Bacteria
• phylum: Actinomycetota
• class: Actinomycetes
• order: Jiangellales
• family: Jiangellaceae
• genus: Jiangella
• species: Jiangella asiatica
• full scientific name: Jiangella asiatica Saygin et al. 2020

@ref: 67770

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Jiangellales

family: Jiangellaceae

genus: Jiangella

species: Jiangella asiatica

full scientific name: Jiangella asiatica Saygin et al. 2020

type strain: yes

Culture and growth conditions

culture temp

• @ref: 67770
• growth: positive
• type: growth
• temperature: 28
• range: mesophilic

Physiology and metabolism

observation

• @ref: 67770
• observation: quinones: MK-9(H₄)

Isolation, sampling and environmental information

isolation

• @ref: 67770
• sample type: Soil from the Karakum Desert
• country: Turkmenistan
• origin.country: TKM
• continent: Asia

taxonmaps

• @ref: 69479
• File name: preview.99_6670.png
• url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_94;96_2023;97_2438;98_3015;99_6670&stattab=map
• Last taxonomy: Jiangella gansuensis
• 16S sequence: MG770727
• Sequence Identity:
• Total samples: 769
• soil counts: 425
• aquatic counts: 42
• animal counts: 248
• plant counts: 54

Sequence information

16S sequences

• @ref: 67770
• description: Jiangella asiatica strain 5K138 16S ribosomal RNA gene, partial sequence
• accession: MG770727
• length: 1483
• database: ena
• NCBI tax ID: 2530372

Genome sequences

• @ref: 67770
• description: Jiangella asiatica 5K138
• accession: GCA_004349065
• assembly level: contig
• database: ncbi
• NCBI tax ID: 2530372

GC content

• @ref: 67770
• GC-content: 71
• method: genome sequence analysis

Genome-based predictions

predictions

External links

@ref: 67770

culture collection no.: JCM 33518, CGMCC 4.7672

literature

• topic: Phylogeny
• Pubmed-ID: 32228773
• title: Genome-based classification of three novel actinobacteria from the Karakum Desert: Jiangella asiatica sp. nov., Jiangella aurantiaca sp. nov. and Jiangella ureilytica sp. nov.
• authors: Saygin H, Ay H, Guven K, Sahin N
• journal: Int J Syst Evol Microbiol
• DOI: 10.1099/ijsem.0.004011
• year: 2020
• mesh: Actinobacteria/*classification/isolation & purification, Bacterial Typing Techniques, Base Composition, Cell Wall/chemistry, DNA, Bacterial/genetics, *Desert Climate, Diaminopimelic Acid/chemistry, Fatty Acids/chemistry, Peptidoglycan/chemistry, Phospholipids/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, *Soil Microbiology, Turkmenistan, Vitamin K 2/analogs & derivatives/chemistry
• topic2: Transcriptome

Reference