General

@ref: 67770

BacDive-ID: 164549

keywords: genome sequence, 16S sequence, Bacteria, mesophilic

description: Apibacter raozihei JCM 33423 is a mesophilic bacterium that was isolated from Feces of bats, Hipposideros spp..

NCBI tax id

• NCBI tax id: 2500547
• Matching level: species

strain history

• @ref: 67770
• history: J. Yang; Natl. Inst. for Commun. Dis. Control & Prev., China CDC, China; HY041.

doi: 10.13145/bacdive164549.20230509.8.1

Name and taxonomic classification

LPSN

• @ref: 20215
• description: domain/bacteria
• keyword: phylum/bacteroidota
• domain: Bacteria
• phylum: Bacteroidota
• class: Flavobacteriia
• order: Flavobacteriales
• family: Weeksellaceae
• genus: Apibacter
• species: Apibacter raozihei
• full scientific name: Apibacter raozihei Huang et al. 2020

@ref: 67770

domain: Bacteria

phylum: Bacteroidetes

class: Flavobacteriia

order: Flavobacteriales

family: Weeksellaceae

genus: Apibacter

species: Apibacter raozihei

full scientific name: Apibacter raozihei Huang et al. 2020

type strain: yes

Culture and growth conditions

culture temp

• @ref: 67770
• growth: positive
• type: growth
• temperature: 30
• range: mesophilic

Physiology and metabolism

observation

• @ref: 67770
• observation: quinones: MK-6

Isolation, sampling and environmental information

isolation

• @ref: 67770
• sample type: Feces of bats, Hipposideros spp.
• host species: Hipposideros spp.
• geographic location: Chongqing City
• country: China
• origin.country: CHN
• continent: Asia

Sequence information

16S sequences

• @ref: 67770
• description: Apibacter raozihei 16S ribosomal RNA gene, partial sequence
• accession: MH608349
• length: 1485
• database: ena
• NCBI tax ID: 2500547

Genome sequences

• @ref: 67770
• description: Apibacter raozihei HY041
• accession: GCA_004014855
• assembly level: complete
• database: ncbi
• NCBI tax ID: 2500547

GC content

• @ref: 67770
• GC-content: 32.2
• method: genome sequence analysis

External links

@ref: 67770

culture collection no.: JCM 33423, CGMCC 1.16567

literature

• topic: Phylogeny
• Pubmed-ID: 31661042
• title: Apibacter raozihei sp. nov. isolated from bat feces of Hipposideros and Taphozous spp.
• authors: Huang Y, Wang X, Yang J, Lu S, Lai XH, Jin D, Pu J, Huang Y, Ren Z, Zhu W, Liang H, Zhou P, Shi Z, Xu J
• journal: Int J Syst Evol Microbiol
• DOI: 10.1099/ijsem.0.003801
• year: 2020
• mesh: Animals, Bacterial Typing Techniques, Base Composition, China, Chiroptera/*microbiology, DNA, Bacterial/genetics, Fatty Acids/chemistry, Feces/*microbiology, Flavobacteriaceae/*classification/isolation & purification, Nucleic Acid Hybridization, Phospholipids/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Vitamin K 2/analogs & derivatives/chemistry
• topic2: Transcriptome

Reference