Strain identifier
BacDive ID: 164354
Type strain: 
Species: Methylocystis sp.
Strain history: S. Kato; Natl. Inst. of Adv. Ind. Sci. & Technol., Japan; La-a12.
NCBI tax ID(s): 1911079 (species)
version 8.1 (current version)
General
@ref: 67770
BacDive-ID: 164354
keywords: 16S sequence, Bacteria, mesophilic
description: Methylocystis sp. JCM 32772 is a mesophilic bacterium that was isolated from Sediment sample collected from a shallow pond at Hokkaido University.
NCBI tax id
- NCBI tax id: 1911079
- Matching level: species
strain history
- @ref: 67770
- history: S. Kato; Natl. Inst. of Adv. Ind. Sci. & Technol., Japan; La-a12.
doi: 10.13145/bacdive164354.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Alphaproteobacteria
- order: Hyphomicrobiales
- family: Methylocystaceae
- genus: Methylocystis
- species: Methylocystis sp.
- full scientific name: Methylocystis (ex Whittenbury et al. 1970) Bowman et al. 1993
@ref: 67770
domain: Bacteria
phylum: Proteobacteria
class: Alphaproteobacteria
order: Hyphomicrobiales
family: Methylocystaceae
genus: Methylocystis
species: Methylocystis sp.
full scientific name: Methylocystis sp.
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 30
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Sediment sample collected from a shallow pond at Hokkaido University
- geographic location: Sapporo, Hokkaido
- country: Japan
- origin.country: JPN
- continent: Asia
taxonmaps
- @ref: 69479
- File name: preview.99_3359.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_86;96_208;97_227;98_256;99_3359&stattab=map
- Last taxonomy: Methylocystis
- 16S sequence: LC380991
- Sequence Identity:
- Total samples: 397
- soil counts: 175
- aquatic counts: 179
- animal counts: 29
- plant counts: 14
Sequence information
16S sequences
- @ref: 67770
- description: Methylocystis sp. La-a12 gene for 16S ribosomal RNA, partial sequence
- accession: LC380991
- length: 1408
- database: ena
- NCBI tax ID: 1911079
External links
@ref: 67770
culture collection no.: JCM 32772
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |