Strain identifier
BacDive ID: 164270
Type strain: 
Species: Halobaculum saliterrae
Strain history: G. M. King; Louisiana State Univ., USA; WSA2.
NCBI tax ID(s): 2073113 (species)
version 8.1 (current version)
General
@ref: 67770
BacDive-ID: 164270
keywords: genome sequence, 16S sequence, Archaea, mesophilic
description: Halobaculum saliterrae JCM 32473 is a mesophilic archaeon that was isolated from Saline soli sampled south of Wendover.
NCBI tax id
- NCBI tax id: 2073113
- Matching level: species
strain history
- @ref: 67770
- history: G. M. King; Louisiana State Univ., USA; WSA2.
doi: 10.13145/bacdive164270.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/archaea
- keyword: phylum/methanobacteriota
- domain: Archaea
- phylum: Methanobacteriota
- class: Halobacteria
- order: Haloferacales
- family: Halorubraceae
- genus: Halobaculum
- species: Halobaculum saliterrae
- full scientific name: Halobaculum saliterrae Myers and King 2020
@ref: 67770
domain: Archaea
phylum: Euryarchaeota
class: Halobacteria
order: Haloferacales
family: Halorubraceae
genus: Halobaculum
species: Halobaculum saliterrae
full scientific name: Halobaculum saliterrae Myers and King 2020
type strain: yes
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Saline soli sampled south of Wendover
- geographic location: Utah
- country: USA
- origin.country: USA
- continent: North America
Sequence information
16S sequences
- @ref: 67770
- description: Uncultured bacterium clone denovo30748_N12_84077 16S ribosomal RNA gene, partial sequence
- accession: MF262901
- length: 467
- database: ena
- NCBI tax ID: 77133
Genome sequences
- @ref: 67770
- description: Halobaculum saliterrae WSA2
- accession: GCA_009831625
- assembly level: contig
- database: ncbi
- NCBI tax ID: 2073113
GC content
- @ref: 67770
- GC-content: 67.62
- method: genome sequence analysis
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| motile | no | 73.27 | no |
| flagellated | no | 96.322 | no |
| gram-positive | no | 97.845 | no |
| anaerobic | no | 95.148 | no |
| aerobic | yes | 84.992 | no |
| halophile | yes | 85.014 | no |
| spore-forming | no | 94.509 | no |
| glucose-util | yes | 89.22 | no |
| thermophile | no | 87.035 | no |
| glucose-ferment | no | 82.593 | no |
External links
@ref: 67770
culture collection no.: JCM 32473, ATCC TSD-127
literature
- topic: Phylogeny
- Pubmed-ID: 32568028
- title: Halobacterium bonnevillei sp. nov., Halobaculum saliterrae sp. nov. and Halovenus carboxidivorans sp. nov., three novel carbon monoxide-oxidizing Halobacteria from saline crusts and soils.
- authors: Myers MR, King GM
- journal: Int J Syst Evol Microbiol
- DOI: 10.1099/ijsem.0.004282
- year: 2020
- mesh: Carbon Monoxide/metabolism, DNA, Archaeal/genetics, Halobacteriaceae/*classification/isolation & purification, Halobacterium/*classification/isolation & purification, *Phylogeny, RNA, Ribosomal, 16S/genetics, *Salinity, Sequence Analysis, DNA, Soil/chemistry, *Soil Microbiology, Utah
- topic2: Enzymology
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ |