Strain identifier
BacDive ID: 164147
Type strain: 
Species: Hymenobacter daejeonensis
Strain history: C.-Y. Ahn; KRIBB, South Korea; PB105.
NCBI tax ID(s): 2249783 (species)
version 8.1 (current version)
General
@ref: 67770
BacDive-ID: 164147
keywords: 16S sequence, Bacteria, mesophilic
description: Hymenobacter daejeonensis JCM 31885 is a mesophilic bacterium that was isolated from Grass soil from Daejeon.
NCBI tax id
- NCBI tax id: 2249783
- Matching level: species
strain history
- @ref: 67770
- history: C.-Y. Ahn; KRIBB, South Korea; PB105.
doi: 10.13145/bacdive164147.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacteroidota
- domain: Bacteria
- phylum: Bacteroidota
- class: Cytophagia
- order: Cytophagales
- family: Hymenobacteraceae
- genus: Hymenobacter
- species: Hymenobacter daejeonensis
- full scientific name: Hymenobacter daejeonensis Jin et al. 2021
@ref: 67770
domain: Bacteria
phylum: Bacteroidetes
class: Cytophagia
order: Cytophagales
family: Hymenobacteraceae
genus: Hymenobacter
species: Hymenobacter daejeonensis
full scientific name: Hymenobacter daejeonensis Jin et al.
type strain: yes
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 30
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Grass soil from Daejeon
- country: Republic of Korea
- origin.country: KOR
- continent: Asia
Sequence information
16S sequences
- @ref: 67770
- description: Hymenobacter sp. strain PB105 16S ribosomal RNA gene, partial sequence
- accession: KY412787
- length: 1454
- database: ena
- NCBI tax ID: 1898978
External links
@ref: 67770
culture collection no.: JCM 31885, KCTC 52579
literature
- topic: Phylogeny
- Pubmed-ID: 29934694
- title: Description of Hymenobacter daejeonensis sp. nov., isolated from grass soil, based on multilocus sequence analysis of the 16S rRNA gene, gyrB and tuf genes.
- authors: Jin L, Wu X, Ko SR, Jin FJ, Li T, Ahn CY, Oh HM, Lee HG
- journal: Antonie Van Leeuwenhoek
- DOI: 10.1007/s10482-018-1119-4
- year: 2018
- mesh: Base Composition, Cytophagaceae/classification/genetics/*isolation & purification/metabolism, DNA, Bacterial/genetics, Fatty Acids/chemistry/metabolism, Multilocus Sequence Typing, Phylogeny, Poaceae/growth & development, RNA, Ribosomal, 16S/genetics, *Soil Microbiology
- topic2: Metabolism
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ |