General

@ref: 67770

BacDive-ID: 164131

keywords: 16S sequence, Bacteria

description: Nocardiopsis nanhaiensis JCM 31823 is a bacterium that was isolated from Marine sediment, at a depth of 2,460 m.

NCBI tax id

• NCBI tax id: 1365493
• Matching level: species

strain history

• @ref: 67770
• history: BCRC 16952 <-- W.-J. Li; Yunnan Inst. of Microbiol., Yunnan Univ., China; 10A08B.

doi: 10.13145/bacdive164131.20240510.9

Name and taxonomic classification

LPSN

• @ref: 20215
• description: domain/bacteria
• keyword: phylum/actinomycetota
• domain: Bacteria
• phylum: Actinomycetota
• class: Actinomycetes
• order: Streptosporangiales
• family: Nocardiopsidaceae
• genus: Nocardiopsis
• species: Nocardiopsis nanhaiensis
• full scientific name: Nocardiopsis nanhaiensis Pan et al. 2015

@ref: 67770

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Streptosporangiales

family: Nocardiopsaceae

genus: Nocardiopsis

species: Nocardiopsis nanhaiensis

full scientific name: Nocardiopsis nanhaiensis Pan et al. 2015

type strain: yes

Culture and growth conditions

culture temp

• @ref: 67770
• growth: positive
• type: growth
• temperature: 28

Physiology and metabolism

observation

• @ref: 67770
• observation: quinones: MK-10(H₆), MK-9(H₆), MK-10(H₄), MK-9(H₄)

Isolation, sampling and environmental information

isolation

• @ref: 67770
• sample type: Marine sediment, (13° 58.498' N 113° 2.353' E) at a depth of 2,460 m
• geographic location: South China Sea (13° 58.498' N 113° 2.353' E) at a depth of 2
• latitude: 13.975
• longitude: 113.039

Sequence information

16S sequences

• @ref: 67770
• description: Nocardiopsis nanhaiensis strain 10A08B 16S ribosomal RNA gene, partial sequence
• accession: KF270095
• length: 1552
• database: nuccore
• NCBI tax ID: 1365493

GC content

• @ref: 67770
• GC-content: 71.6
• method: high performance liquid chromatography (HPLC)

External links

@ref: 67770

culture collection no.: JCM 31823, BCRC 16952

literature

• topic: Phylogeny
• Pubmed-ID: 26297579
• title: Nocardiopsis oceani sp. nov. and Nocardiopsis nanhaiensis sp. nov., actinomycetes isolated from marine sediment of the South China Sea.
• authors: Pan HQ, Zhang DF, Li L, Jiang Z, Cheng J, Zhang YG, Wang HF, Hu JC, Li WJ
• journal: Int J Syst Evol Microbiol
• DOI: 10.1099/ijsem.0.000425
• year: 2015
• mesh: Actinomycetales/*classification/genetics/isolation & purification, Bacterial Typing Techniques, Base Composition, China, DNA, Bacterial/genetics, Diaminopimelic Acid/chemistry, Fatty Acids/chemistry, Geologic Sediments/*microbiology, Molecular Sequence Data, Nucleic Acid Hybridization, Phospholipids/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Seawater/*microbiology, Sequence Analysis, DNA, Vitamin K 2/chemistry
• topic2: Genetics

Reference