Strain identifier
BacDive ID: 164074
Type strain: 
Species: Nitrososphaera gargensis
Strain history: C. Sedlacek; Div. of Microb. Ecol., Univ. of Vienna, Austria; G92-a <-- M. Wagner <-- E. Lebedeva (Ga9.2a, enrichment culture).
NCBI tax ID(s): 497727 (species)
General
@ref: 67770
BacDive-ID: 164074
keywords: genome sequence, 16S sequence, Archaea, thermophilic
description: Nitrososphaera gargensis JCM 31473 is a thermophilic archaeon that was isolated from Microbial mats of the Siberian Garga hot spring.
NCBI tax id
- NCBI tax id: 497727
- Matching level: species
strain history
- @ref: 67770
- history: C. Sedlacek; Div. of Microb. Ecol., Univ. of Vienna, Austria; G92-a <-- M. Wagner <-- E. Lebedeva (Ga9.2a, enrichment culture).
doi: 10.13145/bacdive164074.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/archaea
- keyword: phylum/nitrososphaerota
- domain: Archaea
- phylum: Nitrososphaerota
- class: Nitrososphaeria
- order: Nitrososphaerales
- family: Nitrososphaeraceae
- genus: Nitrososphaera
- species: Nitrososphaera gargensis
- full scientific name: Candidatus Nitrososphaera gargensis Hatzenpichler et al. 2008
@ref: 67770
domain: Archaea
phylum: Thaumarchaeota
class: Nitrososphaeria
order: Nitrososphaerales
family: Nitrososphaeraceae
genus: Nitrososphaera
species: Nitrososphaera gargensis
full scientific name: Nitrososphaera gargensis
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 45
- range: thermophilic
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Microbial mats of the Siberian Garga hot spring
- country: Russia
- origin.country: RUS
Sequence information
16S sequences
- @ref: 67770
- description: Candidatus Nitrososphaera gargensis clone RHGA36c 16S ribosomal RNA gene, partial sequence
- accession: EU281332
- length: 1397
- database: ena
- NCBI tax ID: 497727
Genome sequences
- @ref: 67770
- description: Candidatus Nitrososphaera gargensis Ga9.2, complete genome
- accession: GCA_000303155
- assembly level: complete
- database: ncbi
- NCBI tax ID: 1237085
GC content
- @ref: 67770
- GC-content: 48.4
- method: genome sequence analysis
External links
@ref: 67770
culture collection no.: JCM 31473
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ |