Strain identifier
BacDive ID: 163971
Type strain: 
Species: Spirillospora sp.
Strain history: KCC A-0123 <-- A. Domnas UNCC 1309-b.
NCBI tax ID(s): 2052479 (species)
version 9 (current version)
General
@ref: 67770
BacDive-ID: 163971
keywords: 16S sequence, Bacteria, antibiotic compound production
description: Spirillospora sp. JCM 3123 is a bacterium that produces antibiotic compounds and was isolated from Single sporangium from a contaminated culture of Actinoplanes sp. UNCC 1309.
NCBI tax id
- NCBI tax id: 2052479
- Matching level: species
strain history
- @ref: 67770
- history: KCC A-0123 <-- A. Domnas UNCC 1309-b.
doi: 10.13145/bacdive163971.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Streptosporangiales
- family: Thermomonosporaceae
- genus: Spirillospora
- species: Spirillospora sp.
- full scientific name: Spirillospora Couch 1963 (Approved Lists 1980)
@ref: 67770
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Streptosporangiales
family: Thermomonosporaceae
genus: Spirillospora
species: Spirillospora sp.
full scientific name: Spirillospora sp.
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 28
Physiology and metabolism
compound production
- @ref: 67770
- compound: Spirillomycin-like antibiotic
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Single sporangium from a contaminated culture of Actinoplanes sp. UNCC 1309
- host species: Actinoplanes
Sequence information
16S sequences
| @ref | description | accession | length | database | NCBI tax ID |
|---|---|---|---|---|---|
| 67770 | Spirillospora sp. JCM3123 16S ribosomal RNA gene, partial sequence | AF163124 | 1454 | nuccore | 111808 |
| 124043 | Spirillospora sp. JCM3123 16S ribosomal RNA gene, partial sequence. | AF163123 | 1445 | nuccore | 111797 |
| 124043 | Spirillospora sp. JCM3123 16S-23S ribosomal RNA intergenic spacer sequence | AF163129 | 426 | nuccore | 111804 |
| 124043 | Spirillospora sp. JCM3123 16S-23S ribosomal RNA intergenic spacer sequence | AF163133 | 417 | nuccore | 111807 |
| 124043 | Spirillospora sp. JCM3123 16S-23S ribosomal RNA intergenic spacer sequence | AF163134 | 528 | nuccore | 111797 |
| 124043 | Spirillospora sp. JCM3123 16S-23S ribosomal RNA intergenic spacer sequence | AF163135 | 372 | nuccore | 111808 |
External links
@ref: 67770
culture collection no.: JCM 3123
straininfo link
- @ref: 114148
- straininfo: 63980
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
| 114148 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID63980.1 |
| 124043 | Dr. Isabel Schober, Dr. Julia Koblitz | Data extracted from sequence databases, automatically matched based on designation and taxonomy |