Strain identifier
BacDive ID: 163948
Type strain:
Species: Labilibaculum filiforme
Strain history: V. Vandieken; Univ. of Oldenburg, Germany; 59.10-1M.
NCBI tax ID(s): 1940526 (species)
General
@ref: 67770
BacDive-ID: 163948
DSM-Number: 101179
keywords: 16S sequence, Bacteria, psychrophilic
description: Labilibaculum filiforme JCM 31099 is a psychrophilic bacterium that was isolated from Subsurface of marine sediment from Little Belt .
NCBI tax id
- NCBI tax id: 1940526
- Matching level: species
strain history
- @ref: 67770
- history: V. Vandieken; Univ. of Oldenburg, Germany; 59.10-1M.
doi: 10.13145/bacdive163948.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacteroidota
- domain: Bacteria
- phylum: Bacteroidota
- class: Bacteroidia
- order: Bacteroidales
- family: Marinifilaceae
- genus: Labilibaculum
- species: Labilibaculum filiforme
- full scientific name: Labilibaculum filiforme Vandieken et al. 2019
@ref: 67770
domain: Bacteria
phylum: Bacteroidetes
class: Bacteroidia
order: Bacteroidales
family: Marinifilaceae
genus: Labilibaculum
species: Labilibaculum filiforme
full scientific name: Labilibaculum filiforme Vandieken et al.
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 20
- range: psychrophilic
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Subsurface of marine sediment from Little Belt (Baltic Sea)
taxonmaps
- @ref: 69479
- File name: preview.99_72137.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_15786;96_20709;97_30167;98_50552;99_72137&stattab=map
- Last taxonomy: Labilibaculum
- 16S sequence: KY509307
- Sequence Identity:
- Total samples: 1250
- soil counts: 41
- aquatic counts: 1172
- animal counts: 36
- plant counts: 1
Sequence information
16S sequences
- @ref: 67770
- description: Bacteroidetes bacterium strain 59.10-1M 16S ribosomal RNA gene, partial sequence
- accession: KY509307
- length: 1385
- database: ena
- NCBI tax ID: 1898104
GC content
- @ref: 67770
- GC-content: 35.6
- method: high performance liquid chromatography (HPLC)
External links
@ref: 67770
culture collection no.: JCM 31099, DSM 101179
Reference
@id | authors | title | doi/url |
---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |