Strain identifier

BacDive ID: 163948

Type strain: No

Species: Labilibaculum filiforme

Strain history: V. Vandieken; Univ. of Oldenburg, Germany; 59.10-1M.

NCBI tax ID(s): 1940526 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 67770

BacDive-ID: 163948

DSM-Number: 101179

keywords: 16S sequence, Bacteria, psychrophilic

description: Labilibaculum filiforme JCM 31099 is a psychrophilic bacterium that was isolated from Subsurface of marine sediment from Little Belt .

NCBI tax id

  • NCBI tax id: 1940526
  • Matching level: species

strain history

  • @ref: 67770
  • history: V. Vandieken; Univ. of Oldenburg, Germany; 59.10-1M.

doi: 10.13145/bacdive163948.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacteroidota
  • domain: Bacteria
  • phylum: Bacteroidota
  • class: Bacteroidia
  • order: Bacteroidales
  • family: Marinifilaceae
  • genus: Labilibaculum
  • species: Labilibaculum filiforme
  • full scientific name: Labilibaculum filiforme Vandieken et al. 2019

@ref: 67770

domain: Bacteria

phylum: Bacteroidetes

class: Bacteroidia

order: Bacteroidales

family: Marinifilaceae

genus: Labilibaculum

species: Labilibaculum filiforme

full scientific name: Labilibaculum filiforme Vandieken et al.

type strain: no

Culture and growth conditions

culture temp

  • @ref: 67770
  • growth: positive
  • type: growth
  • temperature: 20
  • range: psychrophilic

Isolation, sampling and environmental information

isolation

  • @ref: 67770
  • sample type: Subsurface of marine sediment from Little Belt (Baltic Sea)

taxonmaps

  • @ref: 69479
  • File name: preview.99_72137.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_15786;96_20709;97_30167;98_50552;99_72137&stattab=map
  • Last taxonomy: Labilibaculum
  • 16S sequence: KY509307
  • Sequence Identity:
  • Total samples: 1250
  • soil counts: 41
  • aquatic counts: 1172
  • animal counts: 36
  • plant counts: 1

Sequence information

16S sequences

  • @ref: 67770
  • description: Bacteroidetes bacterium strain 59.10-1M 16S ribosomal RNA gene, partial sequence
  • accession: KY509307
  • length: 1385
  • database: ena
  • NCBI tax ID: 1898104

GC content

  • @ref: 67770
  • GC-content: 35.6
  • method: high performance liquid chromatography (HPLC)

External links

@ref: 67770

culture collection no.: JCM 31099, DSM 101179

Reference

@idauthorstitledoi/url
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/