General

@ref: 67770

BacDive-ID: 163943

keywords: 16S sequence, Bacteria, mesophilic

description: Solirubrobacter phytolaccae JCM 31078 is a mesophilic bacterium that was isolated from Surface-sterilized roots of Phytolacca acinosa Roxb. from Taibai Mountain in Shaanxi Province.

NCBI tax id

• NCBI tax id: 1404360
• Matching level: species

strain history

• @ref: 67770
• history: CCTCC AB 2013011 <-- L. Wei; Northwest A&F Univ., China; GTGR-8.

doi: 10.13145/bacdive163943.20230509.8.1

Name and taxonomic classification

LPSN

• @ref: 20215
• description: domain/bacteria
• keyword: phylum/actinomycetota
• domain: Bacteria
• phylum: Actinomycetota
• class: Thermoleophilia
• order: Solirubrobacterales
• family: Solirubrobacteraceae
• genus: Solirubrobacter
• species: Solirubrobacter phytolaccae
• full scientific name: Solirubrobacter phytolaccae Wei et al. 2014

@ref: 67770

domain: Bacteria

phylum: Actinobacteria

class: Thermoleophilia

order: Solirubrobacterales

family: Solirubrobacteraceae

genus: Solirubrobacter

species: Solirubrobacter phytolaccae

full scientific name: Solirubrobacter phytolaccae Wei et al. 2014

type strain: yes

Culture and growth conditions

culture temp

• @ref: 67770
• growth: positive
• type: growth
• temperature: 28
• range: mesophilic

Physiology and metabolism

observation

• @ref: 67770
• observation: quinones: MK-7(H₄)

Isolation, sampling and environmental information

isolation

• @ref: 67770
• sample type: Surface-sterilized roots of Phytolacca acinosa Roxb. from Taibai Mountain in Shaanxi Province
• host species: Phytolacca acinosa
• country: China
• origin.country: CHN
• continent: Asia

Sequence information

16S sequences

• @ref: 67770
• description: Solirubrobacter phytolaccae strain GTGR-8 from China 16S ribosomal RNA gene, partial sequence
• accession: KF459924
• length: 1432
• database: ena
• NCBI tax ID: 1404360

GC content

• @ref: 67770
• GC-content: 71
• method: high performance liquid chromatography (HPLC)

External links

@ref: 67770

culture collection no.: JCM 31078, CCTCC AB 2013011, KCTC 29190

literature

• topic: Phylogeny
• Pubmed-ID: 24254741
• title: Solirubrobacter phytolaccae sp. nov., an endophytic bacterium isolated from roots of Phytolacca acinosa Roxb.
• authors: Wei L, Ouyang S, Wang Y, Shen X, Zhang L
• journal: Int J Syst Evol Microbiol
• DOI: 10.1099/ijs.0.057554-0
• year: 2013
• mesh: Actinobacteria/*classification/genetics/isolation & purification, Bacterial Typing Techniques, Base Composition, China, DNA, Bacterial/genetics, Fatty Acids/chemistry, Molecular Sequence Data, Nucleic Acid Hybridization, *Phylogeny, Phytolacca/*microbiology, Plant Roots/microbiology, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, *Soil Microbiology, Vitamin K 2/analogs & derivatives/chemistry
• topic2: Genetics

Reference