Strain identifier

BacDive ID: 163928

Type strain: Yes

Species: Legionella thermalis

Strain history: K. Furuhata; Sch. of Life & Environ. Sci., Azabu Univ., Japan; L-47 <-- H. Inoue; Aquas Corp., Japan.

NCBI tax ID(s): 1444682 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 67770

BacDive-ID: 163928

keywords: 16S sequence, Bacteria, mesophilic

description: Legionella thermalis JCM 30970 is a mesophilic bacterium that was isolated from Hot spring water from Tokyo.

NCBI tax id

  • NCBI tax id: 1444682
  • Matching level: species

strain history

  • @ref: 67770
  • history: K. Furuhata; Sch. of Life & Environ. Sci., Azabu Univ., Japan; L-47 <-- H. Inoue; Aquas Corp., Japan.

doi: 10.13145/bacdive163928.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Legionellales
  • family: Legionellaceae
  • genus: Legionella
  • species: Legionella thermalis
  • full scientific name: Legionella thermalis Ishizaki et al. 2016

@ref: 67770

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Legionellales

family: Legionellaceae

genus: Legionella

species: Legionella thermalis

full scientific name: Legionella thermalis Ishizaki et al. 2016

type strain: yes

Culture and growth conditions

culture temp

  • @ref: 67770
  • growth: positive
  • type: growth
  • temperature: 36
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 67770
  • sample type: Hot spring water from Tokyo
  • country: Japan
  • origin.country: JPN
  • continent: Asia

taxonmaps

  • @ref: 69479
  • File name: preview.99_71795.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_35;96_30635;97_38737;98_50328;99_71795&stattab=map
  • Last taxonomy: Legionella thermalis subclade
  • 16S sequence: AB899895
  • Sequence Identity:
  • Total samples: 1024
  • soil counts: 152
  • aquatic counts: 698
  • animal counts: 152
  • plant counts: 22

Sequence information

16S sequences

  • @ref: 67770
  • description: Legionella thermalis gene for 16S ribosomal RNA, partial sequence
  • accession: AB899895
  • length: 1477
  • database: ena
  • NCBI tax ID: 1444682

GC content

  • @ref: 67770
  • GC-content: 41.5
  • method: high performance liquid chromatography (HPLC)

External links

@ref: 67770

culture collection no.: JCM 30970, KCTC 42799

literature

  • topic: Phylogeny
  • Pubmed-ID: 26865126
  • title: Legionella thermalis sp. nov., isolated from hot spring water in Tokyo, Japan.
  • authors: Ishizaki N, Sogawa K, Inoue H, Agata K, Edagawa A, Miyamoto H, Fukuyama M, Furuhata K
  • journal: Microbiol Immunol
  • DOI: 10.1111/1348-0421.12366
  • year: 2016
  • mesh: Base Sequence, DNA, Bacterial/genetics, Fatty Acids/metabolism, Hot Springs/*microbiology, Hot Temperature, Legionella/chemistry/genetics/*isolation & purification/metabolism, Phospholipids/metabolism, Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Tokyo, Ubiquinone/metabolism, *Water Microbiology
  • topic2: Metabolism

Reference

@idauthorstitledoi/url
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/