Strain identifier
BacDive ID: 163896
Type strain: 
Species: Mangrovimonas sp.
Strain history: G. Furusawa; Centre for Chem. Biol., Univ. Sains Malaysia, Malaysia; TPBH4.
NCBI tax ID(s): 2020865 (species)
version 8.1 (current version)
General
@ref: 67770
BacDive-ID: 163896
keywords: genome sequence, Bacteria, mesophilic
description: Mangrovimonas sp. JCM 30882 is a mesophilic bacterium that was isolated from Estuarine mangrove sediment from Taman Paya Bakau.
NCBI tax id
- NCBI tax id: 2020865
- Matching level: species
strain history
- @ref: 67770
- history: G. Furusawa; Centre for Chem. Biol., Univ. Sains Malaysia, Malaysia; TPBH4.
doi: 10.13145/bacdive163896.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacteroidota
- domain: Bacteria
- phylum: Bacteroidota
- class: Flavobacteriia
- order: Flavobacteriales
- family: Flavobacteriaceae
- genus: Mangrovimonas
- species: Mangrovimonas sp.
- full scientific name: Mangrovimonas Li et al. 2013
@ref: 67770
domain: Bacteria
phylum: Bacteroidetes
class: Flavobacteriia
order: Flavobacteriales
family: Flavobacteriaceae
genus: Mangrovimonas
species: Mangrovimonas sp.
full scientific name: Mangrovimonas sp.
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 30
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Estuarine mangrove sediment from Taman Paya Bakau
- geographic location: Perak
- country: Malaysia
- origin.country: MYS
- continent: Asia
Sequence information
Genome sequences
- @ref: 67770
- description: Mangrovimonas sp. TPBH4
- accession: GCA_001280505
- assembly level: contig
- database: ncbi
- NCBI tax ID: 1645914
GC content
- @ref: 67770
- GC-content: 38.64
- method: genome sequence analysis
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| motile | no | 86.766 | no |
| flagellated | no | 95.049 | no |
| gram-positive | no | 98.2 | no |
| anaerobic | no | 99.364 | no |
| halophile | no | 77.334 | no |
| spore-forming | no | 96.494 | no |
| thermophile | no | 98.473 | no |
| glucose-util | yes | 89.458 | no |
| aerobic | yes | 86.288 | no |
| glucose-ferment | no | 87.71 | no |
External links
@ref: 67770
culture collection no.: JCM 30882, LMG 28913
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ |