General

@ref: 67770

BacDive-ID: 163885

keywords: 16S sequence, Bacteria, mesophilic

description: Chitinophaga salinisoli JCM 30847 is a mesophilic bacterium that was isolated from Saline soil sample collected from Lingxian County.

NCBI tax id

• NCBI tax id: 1608425
• Matching level: species

strain history

• @ref: 67770
• history: Z. Ruan; Inst. of Agric. Resour. & Reg. Plann., CAAS, China; LAM9153.

doi: 10.13145/bacdive163885.20230509.8.1

Name and taxonomic classification

LPSN

• @ref: 20215
• description: domain/bacteria
• keyword: phylum/bacteroidota
• domain: Bacteria
• phylum: Bacteroidota
• class: Chitinophagia
• order: Chitinophagales
• family: Chitinophagaceae
• genus: Chitinophaga
• species: Chitinophaga salinisoli
• full scientific name: Chitinophaga salinisoli Dong et al. 2018

@ref: 67770

domain: Bacteria

phylum: Bacteroidetes

class: Chitinophagia

order: Chitinophagales

family: Chitinophagaceae

genus: Chitinophaga

species: Chitinophaga salinisoli

full scientific name: Chitinophaga salinisoli Dong et al.

type strain: yes

Culture and growth conditions

culture temp

• @ref: 67770
• growth: positive
• type: growth
• temperature: 35
• range: mesophilic

Physiology and metabolism

observation

• @ref: 67770
• observation: quinones: MK-7

Isolation, sampling and environmental information

isolation

• @ref: 67770
• sample type: Saline soil sample collected from Lingxian County
• geographic location: Shandong Province
• country: China
• origin.country: CHN
• continent: Asia

taxonmaps

• @ref: 69479
• File name: preview.99_62721.png
• url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_334;96_9623;97_11594;98_44415;99_62721&stattab=map
• Last taxonomy: Chitinophaga salinisoli subclade
• 16S sequence: KP701019
• Sequence Identity:
• Total samples: 73
• soil counts: 58
• aquatic counts: 5
• animal counts: 1
• plant counts: 9

Sequence information

16S sequences

• @ref: 67770
• description: Chitinophaga salinisoli 16S ribosomal RNA gene, partial sequence
• accession: KP701019
• length: 1438
• database: ena
• NCBI tax ID: 1608425

GC content

• @ref: 67770
• GC-content: 51.6-54.8
• method: thermal denaturation, midpoint method (Tm)

External links

@ref: 67770

culture collection no.: JCM 30847, ACCC 19960

literature

• topic: Phylogeny
• Pubmed-ID: 28980087
• title: Chitinophaga salinisoli sp. nov., isolated from saline soil.
• authors: Dong WW, Kong DL, Zhang Q, Zhu J, Wang YW, Song JL, Zhou YQ, Jiang X, Zhang W, Zhao SM, Ruan ZY
• journal: Antonie Van Leeuwenhoek
• DOI: 10.1007/s10482-017-0947-y
• year: 2017
• mesh: Bacteroidetes/*classification/cytology/isolation & purification/physiology, Base Composition, Metabolomics/methods, Phylogeny, RNA, Ribosomal, 16S/genetics, *Salinity, Sequence Analysis, DNA, Soil/*chemistry, *Soil Microbiology
• topic2: Transcriptome

Reference