Strain identifier
BacDive ID: 163749
Type strain: 
Species: Thermococcus eurythermalis
Strain history: X. Xiao; Shanghai Jiao Tong Univ., China; A501.
NCBI tax ID(s): 1505907 (species)
General
@ref: 67770
BacDive-ID: 163749
keywords: genome sequence, 16S sequence, Archaea, hyperthermophilic
description: Thermococcus eurythermalis JCM 30233 is a hyperthermophilic archaeon that was isolated from Oil-immersed hydrothermal chimney at a depth of 2006.9 m in the Guaymas Basin.
NCBI tax id
- NCBI tax id: 1505907
- Matching level: species
strain history
- @ref: 67770
- history: X. Xiao; Shanghai Jiao Tong Univ., China; A501.
doi: 10.13145/bacdive163749.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/archaea
- keyword: phylum/methanobacteriota
- domain: Archaea
- phylum: Methanobacteriota
- class: Thermococci
- order: Thermococcales
- family: Thermococcaceae
- genus: Thermococcus
- species: Thermococcus eurythermalis
- full scientific name: Thermococcus eurythermalis Zhao et al. 2015
@ref: 67770
domain: Archaea
phylum: Euryarchaeota
class: Thermococci
order: Thermococcales
family: Thermococcaceae
genus: Thermococcus
species: Thermococcus eurythermalis
full scientific name: Thermococcus eurythermalis Zhao et al. 2015
type strain: yes
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 85
- range: hyperthermophilic
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Oil-immersed hydrothermal chimney at a depth of 2006.9 m in the Guaymas Basin
taxonmaps
- @ref: 69479
- File name: preview.99_187110.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_17827;96_68785;97_89427;98_121709;99_187110&stattab=map
- Last taxonomy: Thermococcus
- 16S sequence: KJ616741
- Sequence Identity:
- Total samples: 27
- soil counts: 2
- aquatic counts: 25
Sequence information
16S sequences
- @ref: 67770
- description: Thermococcus eurythermalis strain A501 16S ribosomal RNA gene, partial sequence
- accession: KJ616741
- length: 1488
- database: ena
- NCBI tax ID: 1505907
Genome sequences
| @ref | description | accession | database | NCBI tax ID | assembly level |
|---|---|---|---|---|---|
| 67770 | Thermococcus eurythermalis strain A501, complete genome | CP008887 | ncbi | 1505907 | |
| 66792 | Thermococcus eurythermalis strain A501 | 1505907.13 | patric | 1505907 | plasmid |
GC content
- @ref: 67770
- GC-content: 53.47
- method: genome sequence analysis
External links
@ref: 67770
culture collection no.: JCM 30233, CGMCC 7834
literature
- topic: Phylogeny
- Pubmed-ID: 25288278
- title: Thermococcus eurythermalis sp. nov., a conditional piezophilic, hyperthermophilic archaeon with a wide temperature range for growth, isolated from an oil-immersed chimney in the Guaymas Basin.
- authors: Zhao W, Zeng X, Xiao X
- journal: Int J Syst Evol Microbiol
- DOI: 10.1099/ijs.0.067942-0
- year: 2014
- mesh: Base Composition, DNA, Archaeal/genetics, Hydrothermal Vents/*microbiology, Molecular Sequence Data, *Phylogeny, RNA, Ribosomal, 16S/genetics, Seawater/*microbiology, Sequence Analysis, DNA, Temperature, Thermococcus/*classification/genetics/isolation & purification
- topic2: Genetics
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |