Strain identifier

BacDive ID: 16355

Type strain: Yes

Species: Streptomyces yogyakartensis

Strain Designation: C4R3

Culture col. no.: DSM 41766, NCIMB 13681

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 10555

BacDive-ID: 16355

DSM-Number: 41766

keywords: Bacteria, 16S sequence, mesophilic

description: Streptomyces yogyakartensis C4R3 is a mesophilic bacterium that was isolated from soil around the rhizosphere of Paraserianthes falcataria.

strain history: <- M. Goodfellow, Univ. Newcastle; C4R3

doi: 10.13145/bacdive16355.20201210.5

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinobacteria
  • domain: Bacteria
  • phylum: Actinobacteria
  • class: Actinobacteria
  • order: Streptomycetales
  • family: Streptomycetaceae
  • genus: Streptomyces
  • species: Streptomyces yogyakartensis
  • full scientific name: Streptomyces yogyakartensis Sembiring et al. 2001

@ref: 10555

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Streptomycetaceae

genus: Streptomyces

species: Streptomyces yogyakartensis

full scientific name: Streptomyces yogyakartensis Sembiring et al. 2001

strain designation: C4R3

type strain: yes

Culture and growth conditions

culture medium

  • @ref: 10555
  • name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)
  • growth: yes
  • link: https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium65.pdf

culture temp

  • @ref: 10555
  • growth: positive
  • type: growth
  • temperature: 28
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 10555
  • sample type: soil around the rhizosphere of Paraserianthes falcataria
  • host species: Paraserianthes falcataria
  • geographic location: Java, Yogyakarta
  • country: Indonesia
  • origin.country: IDN
  • continent: Asia

isolation source categories

Cat1Cat2Cat3
#Environmental#Terrestrial#Soil
#Host#Plants#Tree
#Host Body-Site#Plant#Rhizosphere

Safety information

risk assessment

  • @ref: 10555
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Streptomyces sp. C4R3 (S3) partial 16S rRNA geneAJ3918271481ena114692
20218Streptomyces yogyakartensis strain DSM 41766 16S ribosomal RNA gene, partial sequenceHQ2444701376ena114692
20218Streptomyces yogyakartensis gene for 16S rRNA, partial sequence, strain: NBRC 100779AB2499421482ena114692

External links

@ref: 10555

culture collection no.: DSM 41766, NCIMB 13681

straininfo link

@refpassport
20218http://www.straininfo.net/strains/167490
20218http://www.straininfo.net/strains/167491

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
10555Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 41766)https://www.dsmz.de/collection/catalogue/details/culture/DSM-41766
20215D.Gleim, M.Kracht, N.Weiss et. al.http://www.dsmz.de/bacterial-diversity/prokaryotic-nomenclature-up-to-date.htmlProkaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274