Strain identifier

BacDive ID: 163493

Type strain: No

Species: Promicromonospora sp.

Strain history: T. Tateishi; Agency for Cultural Affairs, Japan <-- R. Kigawa and J. Sugiyama; Natl. Res. Inst. for Cult. Prop., Tokyo and TechnoSuruga Lab. Co., Ltd., Japan; T7611-4-5b.

NCBI tax ID(s): 1818724 (species)

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General

@ref: 67770

BacDive-ID: 163493

keywords: 16S sequence, Bacteria

description: Promicromonospora sp. JCM 28304 is a bacterium that was isolated from Blackish viscous gels and plant roots on the east wall 1 .

NCBI tax id

  • NCBI tax id: 1818724
  • Matching level: species

strain history

  • @ref: 67770
  • history: T. Tateishi; Agency for Cultural Affairs, Japan <-- R. Kigawa and J. Sugiyama; Natl. Res. Inst. for Cult. Prop., Tokyo and TechnoSuruga Lab. Co., Ltd., Japan; T7611-4-5b.

doi: 10.13145/bacdive163493.20240510.9

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Micrococcales
  • family: Promicromonosporaceae
  • genus: Promicromonospora
  • species: Promicromonospora sp.
  • full scientific name: Promicromonospora Krassilnikov et al. 1961 (Approved Lists 1980)

@ref: 67770

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Micrococcales

family: Promicromonosporaceae

genus: Promicromonospora

species: Promicromonospora sp.

full scientific name: Promicromonospora sp.

type strain: no

Culture and growth conditions

culture temp

  • @ref: 67770
  • growth: positive
  • type: growth
  • temperature: 28

Isolation, sampling and environmental information

isolation

  • @ref: 67770
  • sample type: Blackish viscous gels and plant roots on the east wall 1 (during relocation of the stone chamber)
  • geographic location: Takamatsuzuka Tumulus, Asuka Village, Nara Pref.
  • country: Japan
  • origin.country: JPN
  • continent: Asia

taxonmaps

  • @ref: 69479
  • File name: preview.99_3773.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_9;96_1939;97_2331;98_2876;99_3773&stattab=map
  • Last taxonomy: Promicromonospora
  • 16S sequence: LC133651
  • Sequence Identity:
  • Total samples: 1696
  • soil counts: 474
  • aquatic counts: 57
  • animal counts: 703
  • plant counts: 462

Sequence information

16S sequences

  • @ref: 67770
  • description: Promicromonospora sp. JCM 28304 gene for 16S ribosomal RNA, partial sequence
  • accession: LC133651
  • length: 1485
  • database: nuccore
  • NCBI tax ID: 1818724

External links

@ref: 67770

culture collection no.: JCM 28304

Reference

@idauthorstitledoi/url
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/